Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm37495-201ENSMUST00000194590 264 ntBASIC3.63□□□□□ -1.83
Upk3aQ9JKX8 Gm43441-201ENSMUST00000201458 205 ntBASIC3.63□□□□□ -1.83
Upk3aQ9JKX8 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.63□□□□□ -1.83
Upk3aQ9JKX8 AC122924.1-201ENSMUST00000222044 163 ntBASIC3.63□□□□□ -1.83
Upk3aQ9JKX8 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.63□□□□□ -1.83
Upk3aQ9JKX8 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.63□□□□□ -1.83
Upk3aQ9JKX8 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC3.63□□□□□ -1.83
Upk3aQ9JKX8 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Upk3aQ9JKX8 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.63□□□□□ -1.83
Upk3aQ9JKX8 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Upk3aQ9JKX8 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Upk3aQ9JKX8 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Upk3aQ9JKX8 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Upk3aQ9JKX8 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Upk3aQ9JKX8 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.63□□□□□ -1.83
Upk3aQ9JKX8 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Mir690-201ENSMUST00000102110 109 ntBASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Gm23063-201ENSMUST00000102350 93 ntBASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Gm14890-201ENSMUST00000117660 676 ntBASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Gm13973-201ENSMUST00000121371 894 ntBASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Gm14649-201ENSMUST00000121814 324 ntBASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Gm23112-201ENSMUST00000158606 125 ntBASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Gm25971-201ENSMUST00000158953 286 ntBASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Gm10357-201ENSMUST00000159886 264 ntBASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Mir3473c-201ENSMUST00000175262 81 ntBASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Gm19891-201ENSMUST00000189771 303 ntBASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Trbv28-201ENSMUST00000192804 264 ntBASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Gm7182-201ENSMUST00000193351 732 ntBASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Gm42850-201ENSMUST00000202094 201 ntBASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Gm19726-201ENSMUST00000205008 240 ntBASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Gm37303-201ENSMUST00000194202 1559 ntBASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Upk3aQ9JKX8 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Gm42728-201ENSMUST00000202644 1552 ntBASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Gm24935-201ENSMUST00000103770 110 ntBASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Gm12467-201ENSMUST00000117625 745 ntBASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Gm8757-201ENSMUST00000119660 372 ntBASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Gm15263-201ENSMUST00000121556 642 ntBASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Gm22345-201ENSMUST00000122644 107 ntBASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Gm25456-201ENSMUST00000157952 109 ntBASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Gm4854-201ENSMUST00000185902 574 ntBASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Gm29492-201ENSMUST00000187124 457 ntBASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Gm29038-201ENSMUST00000191543 678 ntBASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Gm37219-201ENSMUST00000192036 926 ntBASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Gm18672-201ENSMUST00000208035 270 ntBASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 AC154828.2-201ENSMUST00000220908 1070 ntBASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 AC154441.1-201ENSMUST00000223653 1006 ntBASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms