Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm20162-201ENSMUST00000193629 871 ntBASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Gm45499-201ENSMUST00000211656 280 ntBASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Gm45814-201ENSMUST00000212646 775 ntBASIC3.55□□□□□ -1.84
Trem1Q9JKE2 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC3.55□□□□□ -1.84
Trem1Q9JKE2 AC158523.2-201ENSMUST00000222708 548 ntBASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Gm23594-201ENSMUST00000104307 134 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Gm15752-201ENSMUST00000117427 394 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Gm15670-201ENSMUST00000117740 447 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Gm14388-201ENSMUST00000118119 477 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Gm11633-201ENSMUST00000118176 444 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Mup-ps18-201ENSMUST00000120145 531 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Gm13489-201ENSMUST00000121234 971 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Gm12313-201ENSMUST00000121347 421 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Gm25278-201ENSMUST00000157267 120 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Gm24188-201ENSMUST00000157980 108 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Gm26950-201ENSMUST00000182734 498 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Gm8669-201ENSMUST00000183839 945 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Gm28788-201ENSMUST00000189717 375 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Gm18303-201ENSMUST00000190055 1176 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Gm29558-201ENSMUST00000190134 375 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Gm17981-201ENSMUST00000191109 739 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Gm44002-201ENSMUST00000205134 594 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Gm17766-201ENSMUST00000209223 442 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Gm45312-201ENSMUST00000210566 311 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 AC126043.1-201ENSMUST00000221304 1141 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC3.54□□□□□ -1.84
Trem1Q9JKE2 AC131747.1-201ENSMUST00000226159 793 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.54□□□□□ -1.84
Trem1Q9JKE2 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trem1Q9JKE2 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Gm13471-201ENSMUST00000122057 433 ntBASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Gm25824-201ENSMUST00000157092 121 ntBASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Gm23583-201ENSMUST00000158533 289 ntBASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Gm24875-201ENSMUST00000158888 104 ntBASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Gm25942-201ENSMUST00000180080 110 ntBASIC3.53□□□□□ -1.84
Trem1Q9JKE2 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Gm27445-201ENSMUST00000184484 72 ntBASIC3.53□□□□□ -1.84
Trem1Q9JKE2 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Gm18117-201ENSMUST00000187720 742 ntBASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trem1Q9JKE2 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC3.53□□□□□ -1.84
Trem1Q9JKE2 AC125543.1-201ENSMUST00000222778 101 ntBASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Gm44286-201ENSMUST00000204098 1487 ntBASIC3.53□□□□□ -1.84
Trem1Q9JKE2 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
Trem1Q9JKE2 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trem1Q9JKE2 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm23014-201ENSMUST00000104144 130 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm24671-201ENSMUST00000104159 158 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm26019-201ENSMUST00000104407 119 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm14365-201ENSMUST00000117535 587 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm12090-201ENSMUST00000118692 758 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm4342-201ENSMUST00000118982 367 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm8200-201ENSMUST00000122390 222 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm22561-201ENSMUST00000157331 84 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm22870-201ENSMUST00000157501 112 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm22312-201ENSMUST00000158005 130 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm6374-201ENSMUST00000159051 788 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm16563-201ENSMUST00000162673 423 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm9587-201ENSMUST00000172449 454 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 112.9 ms