Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Gm15981-201ENSMUST00000119196 457 ntBASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Gm12486-201ENSMUST00000120887 541 ntBASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Gm15750-201ENSMUST00000120970 616 ntBASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Gm14841-201ENSMUST00000121067 758 ntBASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Gm11384-201ENSMUST00000121376 303 ntBASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Gm25966-201ENSMUST00000157169 117 ntBASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Mir1946a-201ENSMUST00000158360 134 ntBASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Mir6921-201ENSMUST00000183719 80 ntBASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Gm27295-201ENSMUST00000184264 153 ntBASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Mir6989-201ENSMUST00000184812 65 ntBASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Gm7837-201ENSMUST00000190873 412 ntBASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Gm2229-201ENSMUST00000193328 710 ntBASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Gm43407-201ENSMUST00000199816 317 ntBASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Gm42799-201ENSMUST00000201331 328 ntBASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 AC171206.2-201ENSMUST00000215252 389 ntBASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 AC124601.1-201ENSMUST00000220531 135 ntBASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Gm26497-201ENSMUST00000083146 107 ntBASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Mir412-201ENSMUST00000083636 80 ntBASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdhb3Q91XZ7 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Gm42494-201ENSMUST00000196515 3051 ntBASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Gm23979-201ENSMUST00000104071 128 ntBASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Gm11430-201ENSMUST00000121317 217 ntBASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Gm12451-201ENSMUST00000121636 633 ntBASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Mir1900-201ENSMUST00000122714 78 ntBASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Gm25150-201ENSMUST00000157121 60 ntBASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Gm22820-201ENSMUST00000157205 329 ntBASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Gm26412-201ENSMUST00000157666 55 ntBASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Gm23759-201ENSMUST00000158351 268 ntBASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Gm5456-201ENSMUST00000170706 844 ntBASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Gm19790-201ENSMUST00000214414 251 ntBASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 AC130829.3-201ENSMUST00000222735 154 ntBASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 AC174459.1-201ENSMUST00000224476 1943 ntBASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 CT010453.2-201ENSMUST00000227005 483 ntBASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Gm22974-201ENSMUST00000083301 103 ntBASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Olfr467-201ENSMUST00000084756 927 ntBASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Gm5670-201ENSMUST00000093546 372 ntBASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Gm8074-201ENSMUST00000095071 252 ntBASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Gm5362-201ENSMUST00000211968 3085 ntBASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Pcdhb3Q91XZ7 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Pcdhb3Q91XZ7 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdhb3Q91XZ7 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Pcdhb3Q91XZ7 Gm38362-201ENSMUST00000192999 2064 ntBASIC6.11□□□□□ -1.43
Pcdhb3Q91XZ7 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Pcdhb3Q91XZ7 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdhb3Q91XZ7 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdhb3Q91XZ7 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Pcdhb3Q91XZ7 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Pcdhb3Q91XZ7 Gm43857-201ENSMUST00000200343 3079 ntBASIC6.11□□□□□ -1.43
Pcdhb3Q91XZ7 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.11□□□□□ -1.43
Pcdhb3Q91XZ7 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdhb3Q91XZ7 Gm24173-201ENSMUST00000104130 128 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms