Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Lsm1Q8VC85 Gm38330-201ENSMUST00000192743 959 ntBASIC3.61□□□□□ -1.83
Lsm1Q8VC85 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Lsm1Q8VC85 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.61□□□□□ -1.83
Lsm1Q8VC85 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Lsm1Q8VC85 Gm18899-201ENSMUST00000217663 546 ntBASIC3.61□□□□□ -1.83
Lsm1Q8VC85 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.61□□□□□ -1.83
Lsm1Q8VC85 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Lsm1Q8VC85 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Lsm1Q8VC85 Gm22245-201ENSMUST00000082479 103 ntBASIC3.61□□□□□ -1.83
Lsm1Q8VC85 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.61□□□□□ -1.83
Lsm1Q8VC85 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.61□□□□□ -1.83
Lsm1Q8VC85 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Lsm1Q8VC85 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Lsm1Q8VC85 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.61□□□□□ -1.83
Lsm1Q8VC85 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Lsm1Q8VC85 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Gm22272-201ENSMUST00000104039 134 ntBASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Gm22657-201ENSMUST00000104197 132 ntBASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Gm14771-201ENSMUST00000118249 203 ntBASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Gm11830-201ENSMUST00000120175 561 ntBASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Gm22226-201ENSMUST00000157355 109 ntBASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Gm26148-201ENSMUST00000157430 68 ntBASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Gm24061-201ENSMUST00000157489 120 ntBASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Gm23782-201ENSMUST00000157939 120 ntBASIC3.6□□□□□ -1.83
Lsm1Q8VC85 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Gm10067-201ENSMUST00000179462 348 ntBASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Gm11394-201ENSMUST00000181421 517 ntBASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Gm5829-201ENSMUST00000191383 351 ntBASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Gm37828-201ENSMUST00000192496 432 ntBASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 AC144798.1-201ENSMUST00000228120 391 ntBASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Lsm1Q8VC85 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Gm11385-201ENSMUST00000121513 570 ntBASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Gm24739-201ENSMUST00000158855 292 ntBASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Gm27611-201ENSMUST00000184690 108 ntBASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Gm17916-202ENSMUST00000187634 1187 ntBASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Gm38201-201ENSMUST00000192143 387 ntBASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Ighv10-4-201ENSMUST00000193702 299 ntBASIC3.59□□□□□ -1.83
Lsm1Q8VC85 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Gm20177-201ENSMUST00000203705 334 ntBASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Gm8703-201ENSMUST00000203793 730 ntBASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Gm45209-201ENSMUST00000207122 353 ntBASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Gm44871-201ENSMUST00000207821 497 ntBASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.59□□□□□ -1.83
Lsm1Q8VC85 AC164424.1-201ENSMUST00000221690 170 ntBASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Gm3829-201ENSMUST00000222362 619 ntBASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Lsm1Q8VC85 AC153969.1-201ENSMUST00000214047 2605 ntBASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Lsm1Q8VC85 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
Lsm1Q8VC85 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
Lsm1Q8VC85 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Lsm1Q8VC85 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Lsm1Q8VC85 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Lsm1Q8VC85 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Lsm1Q8VC85 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Lsm1Q8VC85 Gm24281-201ENSMUST00000104234 136 ntBASIC3.58□□□□□ -1.84
Lsm1Q8VC85 Gm12230-201ENSMUST00000118301 454 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms