Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Igkv12-66-201ENSMUST00000199305 348 ntBASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Gm6520-201ENSMUST00000200636 410 ntBASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Gm45731-201ENSMUST00000211988 1203 ntBASIC6.26□□□□□ -1.41
Trim47Q8C0E3 AC122332.1-201ENSMUST00000214384 285 ntBASIC6.26□□□□□ -1.41
Trim47Q8C0E3 AC138284.5-201ENSMUST00000214389 652 ntBASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Gm9202-201ENSMUST00000223036 437 ntBASIC6.26□□□□□ -1.41
Trim47Q8C0E3 AC154224.1-201ENSMUST00000224367 403 ntBASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gm38307-201ENSMUST00000195630 1840 ntBASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gm14521-201ENSMUST00000119545 350 ntBASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gm14240-201ENSMUST00000120353 546 ntBASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Scarna6-201ENSMUST00000158656 265 ntBASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gm9830-201ENSMUST00000178509 357 ntBASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Mir6382-201ENSMUST00000184055 110 ntBASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gm28353-201ENSMUST00000186482 570 ntBASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gm28533-201ENSMUST00000186741 570 ntBASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gm38015-201ENSMUST00000193048 188 ntBASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gm43315-201ENSMUST00000198120 313 ntBASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gm45032-201ENSMUST00000205375 520 ntBASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gm18213-201ENSMUST00000207850 178 ntBASIC6.25□□□□□ -1.41
Trim47Q8C0E3 AC159621.1-201ENSMUST00000223249 163 ntBASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim47Q8C0E3 n-R5s27-201ENSMUST00000093699 119 ntBASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim47Q8C0E3 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Trim47Q8C0E3 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gm43027-201ENSMUST00000202906 3691 ntBASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gm45179-201ENSMUST00000208452 4337 ntBASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gm15088-201ENSMUST00000117973 1508 ntBASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Gm15098-201ENSMUST00000119036 1508 ntBASIC6.25□□□□□ -1.41
Trim47Q8C0E3 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim47Q8C0E3 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Trim47Q8C0E3 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Mir875-201ENSMUST00000104698 78 ntBASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm23839-201ENSMUST00000116957 109 ntBASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm13122-201ENSMUST00000118380 453 ntBASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm12303-201ENSMUST00000119506 673 ntBASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm13518-201ENSMUST00000120018 233 ntBASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm12936-201ENSMUST00000121439 301 ntBASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm26041-201ENSMUST00000158148 108 ntBASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm26172-201ENSMUST00000158421 134 ntBASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm25348-201ENSMUST00000158961 111 ntBASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm20397-201ENSMUST00000174520 362 ntBASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm22122-201ENSMUST00000175147 200 ntBASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm23631-201ENSMUST00000175291 123 ntBASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Mir6355-201ENSMUST00000183687 106 ntBASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm27254-201ENSMUST00000183926 517 ntBASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm27409-201ENSMUST00000184727 80 ntBASIC6.24□□□□□ -1.41
Trim47Q8C0E3 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC6.24□□□□□ -1.41
Trim47Q8C0E3 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm28467-201ENSMUST00000190981 318 ntBASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm38670-201ENSMUST00000199248 77 ntBASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm42814-201ENSMUST00000199370 460 ntBASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm44132-201ENSMUST00000205142 151 ntBASIC6.24□□□□□ -1.41
Trim47Q8C0E3 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim47Q8C0E3 AL450317.1-201ENSMUST00000213941 291 ntBASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Olfr151-202ENSMUST00000221099 929 ntBASIC6.24□□□□□ -1.41
Trim47Q8C0E3 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim47Q8C0E3 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim47Q8C0E3 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms