Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Clcn1Q64347 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Clcn1Q64347 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Clcn1Q64347 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Clcn1Q64347 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Clcn1Q64347 AC164102.1-201ENSMUST00000220524 1553 ntBASIC7.17□□□□□ -1.26
Clcn1Q64347 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Clcn1Q64347 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Clcn1Q64347 Gm43648-201ENSMUST00000197775 2485 ntBASIC7.17□□□□□ -1.26
Clcn1Q64347 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
Clcn1Q64347 Gm24889-201ENSMUST00000104388 132 ntBASIC7.17□□□□□ -1.26
Clcn1Q64347 Gm14013-201ENSMUST00000119006 270 ntBASIC7.17□□□□□ -1.26
Clcn1Q64347 Gm23169-201ENSMUST00000157157 112 ntBASIC7.17□□□□□ -1.26
Clcn1Q64347 Gm23233-201ENSMUST00000157301 137 ntBASIC7.17□□□□□ -1.26
Clcn1Q64347 Gm3170-201ENSMUST00000168753 850 ntBASIC7.17□□□□□ -1.26
Clcn1Q64347 Gm3348-201ENSMUST00000177813 850 ntBASIC7.17□□□□□ -1.26
Clcn1Q64347 Gm23966-201ENSMUST00000179823 107 ntBASIC7.17□□□□□ -1.26
Clcn1Q64347 Gm4557-201ENSMUST00000185826 907 ntBASIC7.17□□□□□ -1.26
Clcn1Q64347 Gm4526-201ENSMUST00000186039 920 ntBASIC7.17□□□□□ -1.26
Clcn1Q64347 Gm8708-201ENSMUST00000188500 906 ntBASIC7.17□□□□□ -1.26
Clcn1Q64347 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC7.17□□□□□ -1.26
Clcn1Q64347 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC7.17□□□□□ -1.26
Clcn1Q64347 Gm6543-201ENSMUST00000197353 808 ntBASIC7.17□□□□□ -1.26
Clcn1Q64347 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Clcn1Q64347 Gm18488-201ENSMUST00000215082 364 ntBASIC7.17□□□□□ -1.26
Clcn1Q64347 Gm7822-201ENSMUST00000222433 581 ntBASIC7.17□□□□□ -1.26
Clcn1Q64347 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC7.17□□□□□ -1.26
Clcn1Q64347 AC126275.2-201ENSMUST00000225224 253 ntBASIC7.17□□□□□ -1.26
Clcn1Q64347 AC120553.1-201ENSMUST00000227313 260 ntBASIC7.17□□□□□ -1.26
Clcn1Q64347 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Clcn1Q64347 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Clcn1Q64347 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Clcn1Q64347 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Clcn1Q64347 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Clcn1Q64347 Fus-202ENSMUST00000079045 2623 ntBASIC7.17□□□□□ -1.26
Clcn1Q64347 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Clcn1Q64347 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Clcn1Q64347 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Clcn1Q64347 Gm37101-201ENSMUST00000191656 3660 ntBASIC7.17□□□□□ -1.26
Clcn1Q64347 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Clcn1Q64347 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Clcn1Q64347 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Clcn1Q64347 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Clcn1Q64347 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Clcn1Q64347 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Clcn1Q64347 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clcn1Q64347 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clcn1Q64347 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Clcn1Q64347 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clcn1Q64347 Gm37195-201ENSMUST00000192006 3018 ntBASIC7.16□□□□□ -1.26
Clcn1Q64347 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Clcn1Q64347 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clcn1Q64347 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clcn1Q64347 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clcn1Q64347 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Clcn1Q64347 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Clcn1Q64347 Gm12871-201ENSMUST00000118758 438 ntBASIC7.16□□□□□ -1.26
Clcn1Q64347 Gm11200-201ENSMUST00000121698 448 ntBASIC7.16□□□□□ -1.26
Clcn1Q64347 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC7.16□□□□□ -1.26
Clcn1Q64347 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clcn1Q64347 Gm20545-201ENSMUST00000174739 210 ntBASIC7.16□□□□□ -1.26
Clcn1Q64347 Gm9830-201ENSMUST00000178509 357 ntBASIC7.16□□□□□ -1.26
Clcn1Q64347 Gm27028-201ENSMUST00000182303 399 ntBASIC7.16□□□□□ -1.26
Clcn1Q64347 Gm26928-201ENSMUST00000182674 572 ntBASIC7.16□□□□□ -1.26
Clcn1Q64347 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC7.16□□□□□ -1.26
Clcn1Q64347 Gm44002-201ENSMUST00000205134 594 ntBASIC7.16□□□□□ -1.26
Clcn1Q64347 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC7.16□□□□□ -1.26
Clcn1Q64347 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC7.16□□□□□ -1.26
Clcn1Q64347 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clcn1Q64347 mt-Ti-201ENSMUST00000082393 69 ntBASIC7.16□□□□□ -1.26
Clcn1Q64347 Snora23-201ENSMUST00000082517 184 ntBASIC7.16□□□□□ -1.26
Clcn1Q64347 Gm42537-201ENSMUST00000198260 2574 ntBASIC7.16□□□□□ -1.26
Clcn1Q64347 Gm16270-201ENSMUST00000160327 3238 ntBASIC7.16□□□□□ -1.26
Clcn1Q64347 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clcn1Q64347 Gm37244-201ENSMUST00000191748 1981 ntBASIC7.16□□□□□ -1.26
Clcn1Q64347 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC7.16□□□□□ -1.26
Clcn1Q64347 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Clcn1Q64347 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clcn1Q64347 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Clcn1Q64347 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Clcn1Q64347 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Clcn1Q64347 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clcn1Q64347 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clcn1Q64347 Gm42508-201ENSMUST00000199972 3292 ntBASIC7.16□□□□□ -1.26
Clcn1Q64347 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Clcn1Q64347 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Clcn1Q64347 Gm45493-201ENSMUST00000209494 3948 ntBASIC7.15□□□□□ -1.26
Clcn1Q64347 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Clcn1Q64347 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC7.15□□□□□ -1.26
Clcn1Q64347 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
Clcn1Q64347 Gm11826-201ENSMUST00000118781 438 ntBASIC7.15□□□□□ -1.26
Clcn1Q64347 Gm14933-201ENSMUST00000118840 481 ntBASIC7.15□□□□□ -1.26
Clcn1Q64347 Gm14930-201ENSMUST00000118864 652 ntBASIC7.15□□□□□ -1.26
Clcn1Q64347 Gm14472-201ENSMUST00000119815 282 ntBASIC7.15□□□□□ -1.26
Clcn1Q64347 Gm11761-201ENSMUST00000121392 445 ntBASIC7.15□□□□□ -1.26
Clcn1Q64347 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC7.15□□□□□ -1.26
Clcn1Q64347 Gm24167-201ENSMUST00000177733 124 ntBASIC7.15□□□□□ -1.26
Clcn1Q64347 Gm24028-201ENSMUST00000178991 124 ntBASIC7.15□□□□□ -1.26
Clcn1Q64347 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC7.15□□□□□ -1.26
Clcn1Q64347 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC7.15□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms