Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm29576-201ENSMUST00000188020 678 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm29634-201ENSMUST00000188467 696 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm28896-201ENSMUST00000188609 696 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm29545-201ENSMUST00000188878 694 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm28699-201ENSMUST00000189193 696 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm29058-201ENSMUST00000189510 615 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm29624-201ENSMUST00000190018 615 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm28780-201ENSMUST00000190223 615 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm29366-201ENSMUST00000190481 699 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC4.1□□□□□ -1.75
Trim63Q38HM4 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm28354-201ENSMUST00000190904 678 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm28990-207ENSMUST00000191219 615 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm36468-201ENSMUST00000192119 615 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm37433-201ENSMUST00000192695 678 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm31572-201ENSMUST00000193341 615 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm30175-201ENSMUST00000194173 615 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm37441-201ENSMUST00000194430 678 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm38107-201ENSMUST00000194873 696 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm30858-201ENSMUST00000195516 615 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm25617-202ENSMUST00000198387 132 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm19649-201ENSMUST00000201126 822 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm44208-201ENSMUST00000205199 421 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm6362-201ENSMUST00000217686 836 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 AC183092.2-201ENSMUST00000225542 1153 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm6776-201ENSMUST00000057752 900 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm6065-201ENSMUST00000081336 492 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim63Q38HM4 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC4.1□□□□□ -1.75
Trim63Q38HM4 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Trim63Q38HM4 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Trim63Q38HM4 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC4.1□□□□□ -1.75
Trim63Q38HM4 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Trim63Q38HM4 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Trim63Q38HM4 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trim63Q38HM4 AC125532.1-201ENSMUST00000216210 2334 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm25877-201ENSMUST00000104326 129 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm14086-201ENSMUST00000117152 173 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm11490-201ENSMUST00000118128 272 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm11869-201ENSMUST00000118701 329 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm5843-201ENSMUST00000121631 476 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm16254-201ENSMUST00000131528 730 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm22733-201ENSMUST00000158094 91 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Nron-204ENSMUST00000158971 370 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Fth-ps2-201ENSMUST00000168364 516 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Trim63Q38HM4 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm29073-201ENSMUST00000185563 664 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm29165-201ENSMUST00000190655 664 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm17981-201ENSMUST00000191109 739 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm19498-201ENSMUST00000191128 331 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm29211-201ENSMUST00000191470 664 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm18956-201ENSMUST00000192857 480 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm43408-201ENSMUST00000198263 440 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Ighv1-83-201ENSMUST00000199643 351 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm45032-201ENSMUST00000205375 520 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm44513-201ENSMUST00000206811 439 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm45400-201ENSMUST00000211603 653 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Trim63Q38HM4 AC162467.1-201ENSMUST00000220254 621 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC4.09□□□□□ -1.75
Trim63Q38HM4 AC154592.1-201ENSMUST00000225784 574 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Trim63Q38HM4 Olfr1193-201ENSMUST00000081697 957 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm22740-201ENSMUST00000083439 109 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Mir7b-201ENSMUST00000083557 111 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Trim63Q38HM4 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trim63Q38HM4 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trim63Q38HM4 Gm45262-201ENSMUST00000209917 1463 ntBASIC4.09□□□□□ -1.75
Trim63Q38HM4 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Trim63Q38HM4 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Trim63Q38HM4 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.09□□□□□ -1.76
Trim63Q38HM4 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trim63Q38HM4 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim63Q38HM4 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trim63Q38HM4 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Trim63Q38HM4 Gm5073-201ENSMUST00000118222 820 ntBASIC4.08□□□□□ -1.76
Trim63Q38HM4 Gm13245-201ENSMUST00000119646 260 ntBASIC4.08□□□□□ -1.76
Trim63Q38HM4 Gm6175-201ENSMUST00000121351 400 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms