Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Mir466c-1-201ENSMUST00000200654 84 ntBASIC5.57□□□□□ -1.52
Sox1P53783 Gm19131-201ENSMUST00000203408 789 ntBASIC5.57□□□□□ -1.52
Sox1P53783 Gm45735-201ENSMUST00000212779 319 ntBASIC5.57□□□□□ -1.52
Sox1P53783 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.57□□□□□ -1.52
Sox1P53783 Gm7198-201ENSMUST00000219635 1074 ntBASIC5.57□□□□□ -1.52
Sox1P53783 Gm18618-201ENSMUST00000222211 473 ntBASIC5.57□□□□□ -1.52
Sox1P53783 AC159621.1-201ENSMUST00000223249 163 ntBASIC5.57□□□□□ -1.52
Sox1P53783 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.57□□□□□ -1.52
Sox1P53783 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox1P53783 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Sox1P53783 Gm23939-201ENSMUST00000082880 133 ntBASIC5.57□□□□□ -1.52
Sox1P53783 Olfr895-201ENSMUST00000093864 951 ntBASIC5.57□□□□□ -1.52
Sox1P53783 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Sox1P53783 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.57□□□□□ -1.52
Sox1P53783 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Sox1P53783 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.57□□□□□ -1.52
Sox1P53783 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox1P53783 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox1P53783 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox1P53783 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Sox1P53783 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox1P53783 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.57□□□□□ -1.52
Sox1P53783 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox1P53783 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.57□□□□□ -1.52
Sox1P53783 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox1P53783 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Sox1P53783 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Sox1P53783 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Sox1P53783 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox1P53783 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Sox1P53783 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sox1P53783 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox1P53783 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox1P53783 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Sox1P53783 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.56□□□□□ -1.52
Sox1P53783 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox1P53783 Gm24170-201ENSMUST00000104124 133 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Gm5384-201ENSMUST00000120313 463 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Gm25325-201ENSMUST00000122559 86 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC5.56□□□□□ -1.52
Sox1P53783 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC5.56□□□□□ -1.52
Sox1P53783 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sox1P53783 Gm2182-201ENSMUST00000145243 663 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC5.56□□□□□ -1.52
Sox1P53783 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC5.56□□□□□ -1.52
Sox1P53783 Gm23954-201ENSMUST00000157213 353 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Gm25184-201ENSMUST00000157753 163 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Gm22501-201ENSMUST00000158981 127 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.56□□□□□ -1.52
Sox1P53783 Gm27028-201ENSMUST00000182303 399 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Mir7062-201ENSMUST00000185038 66 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Gm29228-201ENSMUST00000185489 418 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Gm28769-201ENSMUST00000190176 615 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Gm37836-201ENSMUST00000195875 175 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Gm43039-201ENSMUST00000202883 963 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Gm9560-201ENSMUST00000205012 1201 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox1P53783 Gm18507-201ENSMUST00000218855 525 ntBASIC5.56□□□□□ -1.52
Sox1P53783 AC166358.7-201ENSMUST00000221132 108 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC5.56□□□□□ -1.52
Sox1P53783 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC5.56□□□□□ -1.52
Sox1P53783 AC125543.5-201ENSMUST00000222799 108 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC5.56□□□□□ -1.52
Sox1P53783 AC161572.1-201ENSMUST00000227486 640 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sox1P53783 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Mir19a-201ENSMUST00000083482 82 ntBASIC5.56□□□□□ -1.52
Sox1P53783 AC116557.1-201ENSMUST00000219494 1521 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox1P53783 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox1P53783 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox1P53783 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sox1P53783 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sox1P53783 Gm9930-201ENSMUST00000066742 3151 ntBASIC5.56□□□□□ -1.52
Sox1P53783 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Sox1P53783 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox1P53783 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Sox1P53783 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sox1P53783 Gm43874-201ENSMUST00000204853 2798 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox1P53783 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC5.55□□□□□ -1.52
Sox1P53783 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox1P53783 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sox1P53783 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Sox1P53783 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox1P53783 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Sox1P53783 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox1P53783 Gm44164-201ENSMUST00000203605 2561 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sox1P53783 Gm23608-201ENSMUST00000104545 128 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Gm16017-201ENSMUST00000119834 208 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Gm13338-201ENSMUST00000120235 361 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Gm25865-201ENSMUST00000158247 104 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms