Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Shmt1P50431 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Shmt1P50431 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC5.02□□□□□ -1.61
Shmt1P50431 Gm9320-201ENSMUST00000184151 473 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 Gm19206-201ENSMUST00000186401 827 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Shmt1P50431 Gm8403-201ENSMUST00000189712 1298 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 Gm42694-201ENSMUST00000196951 358 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 Mir5121-201ENSMUST00000198528 74 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC5.02□□□□□ -1.61
Shmt1P50431 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Shmt1P50431 Gm44654-201ENSMUST00000208052 329 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC5.02□□□□□ -1.61
Shmt1P50431 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC5.02□□□□□ -1.61
Shmt1P50431 Gm46369-201ENSMUST00000221577 401 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
Shmt1P50431 Olfr881-201ENSMUST00000074611 948 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 Gm7099-201ENSMUST00000080066 554 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 Gm16415-201ENSMUST00000080097 489 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 Gm23300-201ENSMUST00000082712 125 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 AC154511.1-201ENSMUST00000222578 1587 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 Gm6757-201ENSMUST00000189810 1706 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Shmt1P50431 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Shmt1P50431 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Shmt1P50431 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Shmt1P50431 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Shmt1P50431 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.01□□□□□ -1.61
Shmt1P50431 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Shmt1P50431 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Shmt1P50431 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Shmt1P50431 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Shmt1P50431 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Shmt1P50431 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Shmt1P50431 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Shmt1P50431 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Shmt1P50431 Gm15087-201ENSMUST00000117465 1172 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 Gm11971-201ENSMUST00000117715 288 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Shmt1P50431 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.01□□□□□ -1.61
Shmt1P50431 Gm23435-201ENSMUST00000157183 156 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 Gm26085-201ENSMUST00000157900 116 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 Gm15946-201ENSMUST00000160654 423 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC5.01□□□□□ -1.61
Shmt1P50431 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Shmt1P50431 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Shmt1P50431 Gm21737-201ENSMUST00000178112 664 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Shmt1P50431 Gm20874-201ENSMUST00000178356 663 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 Gm21744-201ENSMUST00000178403 662 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Shmt1P50431 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Shmt1P50431 Gm20901-201ENSMUST00000180177 664 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 Gm27690-201ENSMUST00000184596 126 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 Gm27588-201ENSMUST00000185096 263 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Shmt1P50431 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC5.01□□□□□ -1.61
Shmt1P50431 Gm28090-201ENSMUST00000189458 664 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 Gm21647-201ENSMUST00000189755 664 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC5.01□□□□□ -1.61
Shmt1P50431 Gm37837-201ENSMUST00000191743 604 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 Gm37119-201ENSMUST00000195691 389 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 Gm44757-201ENSMUST00000206373 157 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 Gm7624-201ENSMUST00000209702 435 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.01□□□□□ -1.61
Shmt1P50431 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Shmt1P50431 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.01□□□□□ -1.61
Shmt1P50431 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Shmt1P50431 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Shmt1P50431 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Shmt1P50431 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Shmt1P50431 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Shmt1P50431 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5.01□□□□□ -1.61
Shmt1P50431 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Shmt1P50431 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Shmt1P50431 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Shmt1P50431 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Shmt1P50431 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC5□□□□□ -1.61
Shmt1P50431 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5□□□□□ -1.61
Shmt1P50431 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Shmt1P50431 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Shmt1P50431 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Shmt1P50431 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Shmt1P50431 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Shmt1P50431 Gm3675-201ENSMUST00000175904 1653 ntBASIC5□□□□□ -1.61
Shmt1P50431 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Shmt1P50431 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Shmt1P50431 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Shmt1P50431 Gm24835-201ENSMUST00000116777 111 ntBASIC5□□□□□ -1.61
Shmt1P50431 Gm15206-201ENSMUST00000119143 454 ntBASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms