Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm14359-201ENSMUST00000118883 424 ntBASIC6.18□□□□□ -1.42
Rfx1P48377 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC6.18□□□□□ -1.42
Rfx1P48377 Gm14563-201ENSMUST00000120571 354 ntBASIC6.18□□□□□ -1.42
Rfx1P48377 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Rfx1P48377 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC6.18□□□□□ -1.42
Rfx1P48377 Gm16254-201ENSMUST00000131528 730 ntBASIC6.18□□□□□ -1.42
Rfx1P48377 Gm23167-201ENSMUST00000157155 103 ntBASIC6.18□□□□□ -1.42
Rfx1P48377 Gm24060-201ENSMUST00000157494 95 ntBASIC6.18□□□□□ -1.42
Rfx1P48377 Gm24186-201ENSMUST00000157983 127 ntBASIC6.18□□□□□ -1.42
Rfx1P48377 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC6.18□□□□□ -1.42
Rfx1P48377 Gm24757-201ENSMUST00000176987 371 ntBASIC6.18□□□□□ -1.42
Rfx1P48377 Gm19206-201ENSMUST00000186401 827 ntBASIC6.18□□□□□ -1.42
Rfx1P48377 Gm29134-201ENSMUST00000186579 126 ntBASIC6.18□□□□□ -1.42
Rfx1P48377 Gm28241-201ENSMUST00000190916 235 ntBASIC6.18□□□□□ -1.42
Rfx1P48377 Mirlet7e-201ENSMUST00000196737 93 ntBASIC6.18□□□□□ -1.42
Rfx1P48377 Gm43083-201ENSMUST00000199594 476 ntBASIC6.18□□□□□ -1.42
Rfx1P48377 Gm18791-201ENSMUST00000204611 726 ntBASIC6.18□□□□□ -1.42
Rfx1P48377 Gm45910-201ENSMUST00000212493 1003 ntBASIC6.18□□□□□ -1.42
Rfx1P48377 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC6.18□□□□□ -1.42
Rfx1P48377 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Rfx1P48377 Gm26128-201ENSMUST00000083170 110 ntBASIC6.18□□□□□ -1.42
Rfx1P48377 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Rfx1P48377 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Rfx1P48377 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Rfx1P48377 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Rfx1P48377 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Rfx1P48377 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Rfx1P48377 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Rfx1P48377 Gm42876-201ENSMUST00000196989 3215 ntBASIC6.18□□□□□ -1.42
Rfx1P48377 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Rfx1P48377 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Rfx1P48377 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rfx1P48377 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Rfx1P48377 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Rfx1P48377 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Rfx1P48377 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Rfx1P48377 Gm14086-201ENSMUST00000117152 173 ntBASIC6.17□□□□□ -1.42
Rfx1P48377 Gm5073-201ENSMUST00000118222 820 ntBASIC6.17□□□□□ -1.42
Rfx1P48377 Gm11313-201ENSMUST00000118779 432 ntBASIC6.17□□□□□ -1.42
Rfx1P48377 Gm16362-201ENSMUST00000135189 214 ntBASIC6.17□□□□□ -1.42
Rfx1P48377 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC6.17□□□□□ -1.42
Rfx1P48377 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC6.17□□□□□ -1.42
Rfx1P48377 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC6.17□□□□□ -1.42
Rfx1P48377 Gm25430-201ENSMUST00000157614 289 ntBASIC6.17□□□□□ -1.42
Rfx1P48377 Gm25883-201ENSMUST00000157781 271 ntBASIC6.17□□□□□ -1.42
Rfx1P48377 Gm23662-201ENSMUST00000158046 111 ntBASIC6.17□□□□□ -1.42
Rfx1P48377 Gm24731-201ENSMUST00000158227 131 ntBASIC6.17□□□□□ -1.42
Rfx1P48377 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC6.17□□□□□ -1.42
Rfx1P48377 Gm16490-201ENSMUST00000165299 351 ntBASIC6.17□□□□□ -1.42
Rfx1P48377 Gm6632-201ENSMUST00000168425 954 ntBASIC6.17□□□□□ -1.42
Rfx1P48377 Gm8214-201ENSMUST00000172123 351 ntBASIC6.17□□□□□ -1.42
Rfx1P48377 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC6.17□□□□□ -1.42
Rfx1P48377 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Rfx1P48377 Gm18117-201ENSMUST00000187720 742 ntBASIC6.17□□□□□ -1.42
Rfx1P48377 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC6.17□□□□□ -1.42
Rfx1P48377 Gm5285-201ENSMUST00000193089 666 ntBASIC6.17□□□□□ -1.42
Rfx1P48377 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC6.17□□□□□ -1.42
Rfx1P48377 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC6.17□□□□□ -1.42
Rfx1P48377 Gm18602-201ENSMUST00000209794 851 ntBASIC6.17□□□□□ -1.42
Rfx1P48377 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rfx1P48377 AC165092.2-201ENSMUST00000224681 368 ntBASIC6.17□□□□□ -1.42
Rfx1P48377 AC147633.1-201ENSMUST00000225134 259 ntBASIC6.17□□□□□ -1.42
Rfx1P48377 AC120553.1-201ENSMUST00000227313 260 ntBASIC6.17□□□□□ -1.42
Rfx1P48377 AC121978.1-201ENSMUST00000228357 380 ntBASIC6.17□□□□□ -1.42
Rfx1P48377 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rfx1P48377 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Rfx1P48377 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rfx1P48377 Gm24037-201ENSMUST00000082871 180 ntBASIC6.17□□□□□ -1.42
Rfx1P48377 Gm23511-201ENSMUST00000083084 164 ntBASIC6.17□□□□□ -1.42
Rfx1P48377 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rfx1P48377 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rfx1P48377 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rfx1P48377 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Rfx1P48377 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Rfx1P48377 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rfx1P48377 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rfx1P48377 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Rfx1P48377 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Rfx1P48377 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
Rfx1P48377 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Rfx1P48377 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
Rfx1P48377 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rfx1P48377 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Rfx1P48377 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rfx1P48377 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rfx1P48377 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC6.16□□□□□ -1.42
Rfx1P48377 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC6.16□□□□□ -1.42
Rfx1P48377 Gm26078-201ENSMUST00000104067 128 ntBASIC6.16□□□□□ -1.42
Rfx1P48377 n-R5s82-201ENSMUST00000104213 109 ntBASIC6.16□□□□□ -1.42
Rfx1P48377 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Rfx1P48377 Gm14385-201ENSMUST00000116315 876 ntBASIC6.16□□□□□ -1.42
Rfx1P48377 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC6.16□□□□□ -1.42
Rfx1P48377 Gm3943-201ENSMUST00000118606 718 ntBASIC6.16□□□□□ -1.42
Rfx1P48377 Gm11737-201ENSMUST00000118713 468 ntBASIC6.16□□□□□ -1.42
Rfx1P48377 Gm14049-201ENSMUST00000121009 636 ntBASIC6.16□□□□□ -1.42
Rfx1P48377 Gm14804-201ENSMUST00000122322 508 ntBASIC6.16□□□□□ -1.42
Rfx1P48377 Gm26255-201ENSMUST00000122492 103 ntBASIC6.16□□□□□ -1.42
Rfx1P48377 Gm26348-201ENSMUST00000157528 240 ntBASIC6.16□□□□□ -1.42
Rfx1P48377 Gm23225-201ENSMUST00000158121 114 ntBASIC6.16□□□□□ -1.42
Rfx1P48377 Gm23408-201ENSMUST00000158523 265 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms