Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm43932-201ENSMUST00000204499 52 ntBASIC3.93□□□□□ -1.78
Col2a1P28481 Gm44690-201ENSMUST00000207984 382 ntBASIC3.93□□□□□ -1.78
Col2a1P28481 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC3.93□□□□□ -1.78
Col2a1P28481 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.93□□□□□ -1.78
Col2a1P28481 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Col2a1P28481 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.93□□□□□ -1.78
Col2a1P28481 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Col2a1P28481 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.93□□□□□ -1.78
Col2a1P28481 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col2a1P28481 Olfr895-201ENSMUST00000093864 951 ntBASIC3.93□□□□□ -1.78
Col2a1P28481 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.93□□□□□ -1.78
Col2a1P28481 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC3.93□□□□□ -1.78
Col2a1P28481 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
Col2a1P28481 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col2a1P28481 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col2a1P28481 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col2a1P28481 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
Col2a1P28481 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC3.93□□□□□ -1.78
Col2a1P28481 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Col2a1P28481 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col2a1P28481 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col2a1P28481 Gm14240-201ENSMUST00000120353 546 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 Gm13788-201ENSMUST00000120767 601 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 Gm13692-201ENSMUST00000120774 371 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 Gm14065-201ENSMUST00000120848 585 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.92□□□□□ -1.78
Col2a1P28481 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.92□□□□□ -1.78
Col2a1P28481 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 Gm28785-201ENSMUST00000187478 379 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col2a1P28481 Gm18529-201ENSMUST00000193025 1257 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Col2a1P28481 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.92□□□□□ -1.78
Col2a1P28481 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Col2a1P28481 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.92□□□□□ -1.78
Col2a1P28481 Gm44869-201ENSMUST00000208836 357 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 AC172027.1-201ENSMUST00000217659 337 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Col2a1P28481 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
Col2a1P28481 n-R5s205-201ENSMUST00000083149 125 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col2a1P28481 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Col2a1P28481 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Col2a1P28481 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Col2a1P28481 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col2a1P28481 Gm43705-201ENSMUST00000195958 3717 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col2a1P28481 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Col2a1P28481 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col2a1P28481 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Col2a1P28481 Gm12106-201ENSMUST00000116006 1200 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 Gm12677-201ENSMUST00000118668 426 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 Gm22988-201ENSMUST00000122759 144 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 Gm21990-201ENSMUST00000124692 383 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 Gm18604-201ENSMUST00000172535 558 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 Mir6413-201ENSMUST00000184049 108 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC3.92□□□□□ -1.78
Col2a1P28481 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Col2a1P28481 Gm29011-201ENSMUST00000191059 712 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 Gm45246-201ENSMUST00000210820 367 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 AC154838.2-201ENSMUST00000226602 747 ntBASIC3.92□□□□□ -1.78
Col2a1P28481 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Col2a1P28481 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col2a1P28481 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col2a1P28481 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col2a1P28481 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
Col2a1P28481 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
Col2a1P28481 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
Col2a1P28481 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col2a1P28481 Gm38375-201ENSMUST00000194610 2227 ntBASIC3.91□□□□□ -1.78
Col2a1P28481 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.91□□□□□ -1.78
Col2a1P28481 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col2a1P28481 Gm13803-201ENSMUST00000117547 489 ntBASIC3.91□□□□□ -1.78
Col2a1P28481 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col2a1P28481 Gm15986-201ENSMUST00000122153 400 ntBASIC3.91□□□□□ -1.78
Col2a1P28481 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col2a1P28481 Gm26088-201ENSMUST00000157896 131 ntBASIC3.91□□□□□ -1.78
Col2a1P28481 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col2a1P28481 Gm3123-201ENSMUST00000163480 480 ntBASIC3.91□□□□□ -1.78
Col2a1P28481 Gm6445-201ENSMUST00000189515 1112 ntBASIC3.91□□□□□ -1.78
Col2a1P28481 Gm37900-201ENSMUST00000195510 3805 ntBASIC3.91□□□□□ -1.78
Col2a1P28481 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col2a1P28481 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col2a1P28481 Gm7948-201ENSMUST00000212607 844 ntBASIC3.91□□□□□ -1.78
Col2a1P28481 AC153932.1-201ENSMUST00000218558 787 ntBASIC3.91□□□□□ -1.78
Col2a1P28481 CT009764.1-201ENSMUST00000222260 483 ntBASIC3.91□□□□□ -1.78
Col2a1P28481 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col2a1P28481 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col2a1P28481 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.91□□□□□ -1.78
Col2a1P28481 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.9□□□□□ -1.78
Col2a1P28481 Gm2033-201ENSMUST00000210753 2287 ntBASIC3.9□□□□□ -1.78
Col2a1P28481 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.9□□□□□ -1.78
Col2a1P28481 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms