Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC1.12□□□□□ -2.23
Gm4559A4IF42 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Gm4559A4IF42 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Gm4559A4IF42 Vps8-202ENSMUST00000096192 4942 ntTSL 5 BASIC1.12□□□□□ -2.23
Gm4559A4IF42 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Gm4559A4IF42 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
Gm4559A4IF42 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Gm4559A4IF42 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC1.12□□□□□ -2.23
Gm4559A4IF42 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Gm4559A4IF42 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC1.12□□□□□ -2.23
Gm4559A4IF42 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
Gm4559A4IF42 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Gm4559A4IF42 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Gm4559A4IF42 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Gm4559A4IF42 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
Gm4559A4IF42 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Gm4559A4IF42 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Gm4559A4IF42 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Mkl1-201ENSMUST00000109579 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Fam171a1-202ENSMUST00000072955 3364 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm42463-201ENSMUST00000198041 4886 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Il6st-210ENSMUST00000184949 2571 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Fut10-203ENSMUST00000161502 3527 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Nkd1-202ENSMUST00000169179 4081 ntTSL 2 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Cpm-201ENSMUST00000020399 5195 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Mkl1-203ENSMUST00000131235 4222 ntTSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Ammecr1l-201ENSMUST00000115808 4769 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Cdkl5-201ENSMUST00000087104 3269 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Tdrd1-203ENSMUST00000111606 4914 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Luc7l-202ENSMUST00000114976 4934 ntAPPRIS P4 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Ndrg1-201ENSMUST00000005256 2886 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Fbxo34-202ENSMUST00000095941 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Kcnab2-205ENSMUST00000159840 3574 ntAPPRIS ALT1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Synpo2-201ENSMUST00000051443 3719 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Tvp23a-201ENSMUST00000051118 3315 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Hspbap1-201ENSMUST00000023555 4590 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Rims2-201ENSMUST00000042917 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Slc35f6-201ENSMUST00000062962 3088 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Inpp4a-205ENSMUST00000132401 3234 ntTSL 5 BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Gm37759-201ENSMUST00000194155 3246 ntBASIC1.11□□□□□ -2.23
Gm4559A4IF42 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Gm4559A4IF42 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms