Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm45209-201ENSMUST00000207122 353 ntBASIC5.81□□□□□ -1.48
Nubp1Q9R060 Gm44859-201ENSMUST00000207831 94 ntBASIC5.81□□□□□ -1.48
Nubp1Q9R060 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.81□□□□□ -1.48
Nubp1Q9R060 Gm2059-201ENSMUST00000212025 287 ntBASIC5.81□□□□□ -1.48
Nubp1Q9R060 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.81□□□□□ -1.48
Nubp1Q9R060 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC5.81□□□□□ -1.48
Nubp1Q9R060 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC5.81□□□□□ -1.48
Nubp1Q9R060 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.81□□□□□ -1.48
Nubp1Q9R060 AV026068-231ENSMUST00000225862 482 ntBASIC5.81□□□□□ -1.48
Nubp1Q9R060 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.81□□□□□ -1.48
Nubp1Q9R060 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.81□□□□□ -1.48
Nubp1Q9R060 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Nubp1Q9R060 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Nubp1Q9R060 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Nubp1Q9R060 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Nubp1Q9R060 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Nubp1Q9R060 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Nubp1Q9R060 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Nubp1Q9R060 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Nubp1Q9R060 Gm37183-201ENSMUST00000191712 3405 ntBASIC5.81□□□□□ -1.48
Nubp1Q9R060 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Nubp1Q9R060 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Nubp1Q9R060 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Nubp1Q9R060 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Nubp1Q9R060 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Gm37192-201ENSMUST00000194479 1348 ntBASIC5.8□□□□□ -1.48
Nubp1Q9R060 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.8□□□□□ -1.48
Nubp1Q9R060 AC116950.1-201ENSMUST00000226322 3250 ntBASIC5.8□□□□□ -1.48
Nubp1Q9R060 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Nubp1Q9R060 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Gm24867-201ENSMUST00000104161 107 ntBASIC5.8□□□□□ -1.48
Nubp1Q9R060 Gm16242-201ENSMUST00000117741 334 ntBASIC5.8□□□□□ -1.48
Nubp1Q9R060 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Gm25550-201ENSMUST00000158079 128 ntBASIC5.8□□□□□ -1.48
Nubp1Q9R060 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC5.8□□□□□ -1.48
Nubp1Q9R060 Gm8524-201ENSMUST00000186232 379 ntBASIC5.8□□□□□ -1.48
Nubp1Q9R060 Gm5058-201ENSMUST00000187331 463 ntBASIC5.8□□□□□ -1.48
Nubp1Q9R060 Gm8242-202ENSMUST00000193056 475 ntBASIC5.8□□□□□ -1.48
Nubp1Q9R060 Gm37349-201ENSMUST00000194205 624 ntBASIC5.8□□□□□ -1.48
Nubp1Q9R060 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Gm7041-201ENSMUST00000201227 524 ntBASIC5.8□□□□□ -1.48
Nubp1Q9R060 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC5.8□□□□□ -1.48
Nubp1Q9R060 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.8□□□□□ -1.48
Nubp1Q9R060 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.8□□□□□ -1.48
Nubp1Q9R060 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Gm46194-201ENSMUST00000218136 320 ntBASIC5.8□□□□□ -1.48
Nubp1Q9R060 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nubp1Q9R060 AC122024.1-201ENSMUST00000219276 4850 ntBASIC5.8□□□□□ -1.48
Nubp1Q9R060 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC5.8□□□□□ -1.48
Nubp1Q9R060 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nubp1Q9R060 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nubp1Q9R060 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Nubp1Q9R060 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nubp1Q9R060 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nubp1Q9R060 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nubp1Q9R060 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Nubp1Q9R060 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC5.79□□□□□ -1.48
Nubp1Q9R060 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Nubp1Q9R060 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Nubp1Q9R060 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC5.79□□□□□ -1.48
Nubp1Q9R060 Mir690-201ENSMUST00000102110 109 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Nubp1Q9R060 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Nubp1Q9R060 Gm26147-201ENSMUST00000104479 114 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nubp1Q9R060 Gm13329-201ENSMUST00000117063 265 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 Gm15044-201ENSMUST00000120703 598 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 Gm6175-201ENSMUST00000121351 400 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 n-R5s192-201ENSMUST00000122577 119 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 Gm24630-201ENSMUST00000122768 106 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.79□□□□□ -1.48
Nubp1Q9R060 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Nubp1Q9R060 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Nubp1Q9R060 n-R5s109-201ENSMUST00000179195 119 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms