Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
Trim56Q80VI1 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Trim56Q80VI1 Gm26156-201ENSMUST00000116999 123 ntBASIC5.96□□□□□ -1.46
Trim56Q80VI1 Gm14711-201ENSMUST00000117056 217 ntBASIC5.96□□□□□ -1.46
Trim56Q80VI1 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim56Q80VI1 Gm11790-201ENSMUST00000119569 455 ntBASIC5.96□□□□□ -1.46
Trim56Q80VI1 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC5.96□□□□□ -1.46
Trim56Q80VI1 Gm25706-201ENSMUST00000157828 247 ntBASIC5.96□□□□□ -1.46
Trim56Q80VI1 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC5.96□□□□□ -1.46
Trim56Q80VI1 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.96□□□□□ -1.46
Trim56Q80VI1 Gm6486-201ENSMUST00000166202 434 ntBASIC5.96□□□□□ -1.46
Trim56Q80VI1 Gm5777-201ENSMUST00000177265 448 ntBASIC5.96□□□□□ -1.46
Trim56Q80VI1 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC5.96□□□□□ -1.46
Trim56Q80VI1 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC5.96□□□□□ -1.46
Trim56Q80VI1 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.96□□□□□ -1.46
Trim56Q80VI1 Gm37658-201ENSMUST00000192672 315 ntBASIC5.96□□□□□ -1.46
Trim56Q80VI1 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.96□□□□□ -1.46
Trim56Q80VI1 Gm44330-201ENSMUST00000200106 143 ntBASIC5.96□□□□□ -1.46
Trim56Q80VI1 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.96□□□□□ -1.46
Trim56Q80VI1 Gm44818-201ENSMUST00000206608 358 ntBASIC5.96□□□□□ -1.46
Trim56Q80VI1 Gm44611-201ENSMUST00000207507 355 ntBASIC5.96□□□□□ -1.46
Trim56Q80VI1 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Trim56Q80VI1 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.96□□□□□ -1.46
Trim56Q80VI1 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.96□□□□□ -1.46
Trim56Q80VI1 AC138718.1-201ENSMUST00000225947 1009 ntBASIC5.96□□□□□ -1.46
Trim56Q80VI1 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Trim56Q80VI1 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Trim56Q80VI1 Gm26206-201ENSMUST00000082908 110 ntBASIC5.96□□□□□ -1.46
Trim56Q80VI1 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC5.96□□□□□ -1.46
Trim56Q80VI1 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Trim56Q80VI1 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.96□□□□□ -1.46
Trim56Q80VI1 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim56Q80VI1 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Trim56Q80VI1 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.46
Trim56Q80VI1 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.96□□□□□ -1.46
Trim56Q80VI1 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Trim56Q80VI1 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Trim56Q80VI1 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Trim56Q80VI1 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Trim56Q80VI1 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Trim56Q80VI1 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Trim56Q80VI1 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Trim56Q80VI1 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim56Q80VI1 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Trim56Q80VI1 Gm3267-201ENSMUST00000118671 473 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 Gm5942-201ENSMUST00000120046 439 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 Gm12854-201ENSMUST00000128518 297 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trim56Q80VI1 Gm16254-201ENSMUST00000131528 730 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trim56Q80VI1 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trim56Q80VI1 Gm23534-201ENSMUST00000157539 97 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim56Q80VI1 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trim56Q80VI1 Mir6903-201ENSMUST00000183597 88 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 Gm5116-201ENSMUST00000187732 463 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 Gm29627-201ENSMUST00000187984 463 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 Gm29148-201ENSMUST00000188140 336 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 Gm38104-201ENSMUST00000195121 1895 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 Gm43541-201ENSMUST00000197208 581 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 Gm43559-201ENSMUST00000198755 466 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 Gm5284-201ENSMUST00000199053 903 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 Gm21112-201ENSMUST00000212224 578 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 Gm7760-201ENSMUST00000212265 578 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 Gm7807-201ENSMUST00000212475 578 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 AC132954.1-201ENSMUST00000221017 342 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 AC160931.2-201ENSMUST00000221445 351 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 CT030184.1-201ENSMUST00000222393 416 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 AC167192.2-201ENSMUST00000224794 198 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trim56Q80VI1 Gm7665-201ENSMUST00000076710 297 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Trim56Q80VI1 Gm24610-201ENSMUST00000083270 109 ntBASIC5.95□□□□□ -1.46
Trim56Q80VI1 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim56Q80VI1 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim56Q80VI1 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Trim56Q80VI1 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.95□□□□□ -1.46
Trim56Q80VI1 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Trim56Q80VI1 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim56Q80VI1 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm25943-201ENSMUST00000103791 90 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Mir466b-7-201ENSMUST00000103804 88 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Mir466b-5-201ENSMUST00000103900 88 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm11970-201ENSMUST00000116105 320 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm15034-201ENSMUST00000120043 349 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm25784-201ENSMUST00000122524 81 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm25781-201ENSMUST00000122527 84 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm25293-201ENSMUST00000122792 285 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 136.4 ms