Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.64□□□□□ -1.51
Trim28Q62318 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Trim28Q62318 Gm22758-201ENSMUST00000102275 96 ntBASIC5.64□□□□□ -1.51
Trim28Q62318 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Trim28Q62318 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim28Q62318 Gm8666-201ENSMUST00000117517 292 ntBASIC5.64□□□□□ -1.51
Trim28Q62318 Gm13162-201ENSMUST00000121481 454 ntBASIC5.64□□□□□ -1.51
Trim28Q62318 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim28Q62318 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC5.64□□□□□ -1.51
Trim28Q62318 Gm23554-201ENSMUST00000157818 110 ntBASIC5.64□□□□□ -1.51
Trim28Q62318 Mir6975-201ENSMUST00000184879 61 ntBASIC5.64□□□□□ -1.51
Trim28Q62318 Gm27332-201ENSMUST00000184893 112 ntBASIC5.64□□□□□ -1.51
Trim28Q62318 Gm7634-201ENSMUST00000185778 553 ntBASIC5.64□□□□□ -1.51
Trim28Q62318 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC5.64□□□□□ -1.51
Trim28Q62318 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC5.64□□□□□ -1.51
Trim28Q62318 Gm28802-201ENSMUST00000188624 944 ntBASIC5.64□□□□□ -1.51
Trim28Q62318 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC5.64□□□□□ -1.51
Trim28Q62318 Gm28190-201ENSMUST00000189766 722 ntBASIC5.64□□□□□ -1.51
Trim28Q62318 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim28Q62318 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5.64□□□□□ -1.51
Trim28Q62318 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC5.64□□□□□ -1.51
Trim28Q62318 Gm17887-201ENSMUST00000200194 547 ntBASIC5.64□□□□□ -1.51
Trim28Q62318 Gm44050-201ENSMUST00000204263 527 ntBASIC5.64□□□□□ -1.51
Trim28Q62318 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC5.64□□□□□ -1.51
Trim28Q62318 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Trim28Q62318 Gm6171-201ENSMUST00000220760 645 ntBASIC5.64□□□□□ -1.51
Trim28Q62318 AC160756.1-201ENSMUST00000227266 235 ntBASIC5.64□□□□□ -1.51
Trim28Q62318 AC154838.1-201ENSMUST00000228944 911 ntBASIC5.64□□□□□ -1.51
Trim28Q62318 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
Trim28Q62318 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Trim28Q62318 Gm23510-201ENSMUST00000083083 163 ntBASIC5.64□□□□□ -1.51
Trim28Q62318 Gm23104-201ENSMUST00000083722 104 ntBASIC5.64□□□□□ -1.51
Trim28Q62318 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Trim28Q62318 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Trim28Q62318 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim28Q62318 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.64□□□□□ -1.51
Trim28Q62318 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Trim28Q62318 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim28Q62318 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Trim28Q62318 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Trim28Q62318 Gm13058-201ENSMUST00000117097 1435 ntBASIC5.64□□□□□ -1.51
Trim28Q62318 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Trim28Q62318 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Trim28Q62318 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim28Q62318 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trim28Q62318 Gm24835-201ENSMUST00000116777 111 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 Gm11798-201ENSMUST00000119150 421 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 Gm13865-201ENSMUST00000120957 865 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 Clec2f-201ENSMUST00000121051 374 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 Gm14982-201ENSMUST00000121102 442 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 Gm12340-201ENSMUST00000121617 462 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC5.63□□□□□ -1.51
Trim28Q62318 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC5.63□□□□□ -1.51
Trim28Q62318 Gm28956-201ENSMUST00000189047 427 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 Trbv11-201ENSMUST00000194354 260 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC5.63□□□□□ -1.51
Trim28Q62318 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 Gm43493-201ENSMUST00000199837 202 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 Gm44773-201ENSMUST00000207374 557 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC5.63□□□□□ -1.51
Trim28Q62318 Gm2059-201ENSMUST00000212025 287 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 Gm18016-201ENSMUST00000216119 801 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 AC174776.1-201ENSMUST00000221509 405 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 AC174776.2-201ENSMUST00000222561 405 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 AC192333.1-201ENSMUST00000224573 376 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Trim28Q62318 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Trim28Q62318 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Trim28Q62318 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.63□□□□□ -1.51
Trim28Q62318 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Trim28Q62318 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Trim28Q62318 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trim28Q62318 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim28Q62318 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim28Q62318 Gm36927-201ENSMUST00000192504 1841 ntBASIC5.62□□□□□ -1.51
Trim28Q62318 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim28Q62318 Gm38235-201ENSMUST00000194600 4952 ntBASIC5.62□□□□□ -1.51
Trim28Q62318 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Trim28Q62318 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.62□□□□□ -1.51
Trim28Q62318 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim28Q62318 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim28Q62318 Gm13386-201ENSMUST00000117677 124 ntBASIC5.62□□□□□ -1.51
Trim28Q62318 Gm13640-201ENSMUST00000118445 264 ntBASIC5.62□□□□□ -1.51
Trim28Q62318 Gm11606-201ENSMUST00000120706 617 ntBASIC5.62□□□□□ -1.51
Trim28Q62318 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Trim28Q62318 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim28Q62318 Mup-ps4-201ENSMUST00000151005 539 ntBASIC5.62□□□□□ -1.51
Trim28Q62318 Gm23852-201ENSMUST00000158376 77 ntBASIC5.62□□□□□ -1.51
Trim28Q62318 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim28Q62318 Gm28830-201ENSMUST00000188192 213 ntBASIC5.62□□□□□ -1.51
Trim28Q62318 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim28Q62318 Gm38150-201ENSMUST00000192996 452 ntBASIC5.62□□□□□ -1.51
Trim28Q62318 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim28Q62318 Gm8790-201ENSMUST00000194108 322 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms