Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Gm15361-201ENSMUST00000119320 444 ntBASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Gm12691-201ENSMUST00000120186 456 ntBASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Gm14687-201ENSMUST00000120206 363 ntBASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Gm23755-201ENSMUST00000157578 343 ntBASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Gm24008-201ENSMUST00000157733 138 ntBASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Gm23666-201ENSMUST00000158053 116 ntBASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Mir1934-201ENSMUST00000158127 83 ntBASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Gm8641-201ENSMUST00000186995 826 ntBASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Gm29534-201ENSMUST00000187328 382 ntBASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Gm36934-201ENSMUST00000192007 306 ntBASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Gm37698-201ENSMUST00000192605 463 ntBASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Gm37193-201ENSMUST00000193087 513 ntBASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Gm43345-201ENSMUST00000199484 269 ntBASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Gm44972-201ENSMUST00000206419 406 ntBASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Gm45226-201ENSMUST00000206602 288 ntBASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Gm45420-201ENSMUST00000211243 425 ntBASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Olfr790-204ENSMUST00000218901 1070 ntBASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Gm37747-201ENSMUST00000193717 4003 ntBASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trav6-2Q5R1I4 AC154548.1-201ENSMUST00000225844 3838 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gm14385-201ENSMUST00000116315 876 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gm11890-201ENSMUST00000119585 417 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gm15387-201ENSMUST00000120421 648 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gm14977-201ENSMUST00000121626 812 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gm11349-201ENSMUST00000122209 1116 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gm16359-201ENSMUST00000124511 289 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gm27025-201ENSMUST00000182392 942 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gm18406-201ENSMUST00000185872 669 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gm28974-201ENSMUST00000187893 231 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gm29452-201ENSMUST00000187996 313 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gm28860-201ENSMUST00000188103 313 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gm28872-201ENSMUST00000191518 158 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gm36382-201ENSMUST00000198892 541 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gm45034-201ENSMUST00000206831 482 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 AC118733.1-201ENSMUST00000217387 1217 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 AC152062.1-201ENSMUST00000218129 386 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 AL645546.2-201ENSMUST00000224526 265 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 AC192088.2-201ENSMUST00000227590 411 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gm5518-201ENSMUST00000084171 648 ntBASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC3.29□□□□□ -1.88
Trav6-2Q5R1I4 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 AC149294.7-201ENSMUST00000227475 1432 ntBASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Gm12880-201ENSMUST00000120652 494 ntBASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms