Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm25883-201ENSMUST00000157781 271 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm22989-201ENSMUST00000158313 86 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm24940-201ENSMUST00000158326 108 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm26172-201ENSMUST00000158421 134 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm24303-201ENSMUST00000178237 126 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm24968-201ENSMUST00000179817 107 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm27476-201ENSMUST00000183366 104 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm29330-201ENSMUST00000190032 699 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm37097-201ENSMUST00000193676 336 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm42578-201ENSMUST00000199960 194 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm45660-201ENSMUST00000210267 151 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm8523-201ENSMUST00000211386 552 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC6.22□□□□□ -1.41
Col9a1Q05722 AC155712.1-201ENSMUST00000219704 160 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 AC164561.1-201ENSMUST00000220414 115 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm22350-201ENSMUST00000083924 156 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm23741-201ENSMUST00000097237 171 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm37686-201ENSMUST00000194099 2309 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col9a1Q05722 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col9a1Q05722 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col9a1Q05722 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm37745-201ENSMUST00000193304 8163 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col9a1Q05722 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Col9a1Q05722 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col9a1Q05722 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col9a1Q05722 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.21□□□□□ -1.41
Col9a1Q05722 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Col9a1Q05722 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col9a1Q05722 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col9a1Q05722 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.41
Col9a1Q05722 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.41
Col9a1Q05722 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col9a1Q05722 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Col9a1Q05722 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col9a1Q05722 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Col9a1Q05722 Gm37403-201ENSMUST00000193775 3521 ntBASIC6.21□□□□□ -1.42
Col9a1Q05722 Gm15058-201ENSMUST00000117689 458 ntBASIC6.21□□□□□ -1.42
Col9a1Q05722 Gm7312-201ENSMUST00000118798 469 ntBASIC6.21□□□□□ -1.42
Col9a1Q05722 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col9a1Q05722 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Col9a1Q05722 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC6.21□□□□□ -1.42
Col9a1Q05722 Gm25720-201ENSMUST00000157503 105 ntBASIC6.21□□□□□ -1.42
Col9a1Q05722 Gm25227-201ENSMUST00000158204 112 ntBASIC6.21□□□□□ -1.42
Col9a1Q05722 Gm23179-201ENSMUST00000158693 304 ntBASIC6.21□□□□□ -1.42
Col9a1Q05722 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC6.21□□□□□ -1.42
Col9a1Q05722 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.21□□□□□ -1.42
Col9a1Q05722 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC6.21□□□□□ -1.42
Col9a1Q05722 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.21□□□□□ -1.42
Col9a1Q05722 Gm21893-201ENSMUST00000179119 397 ntBASIC6.21□□□□□ -1.42
Col9a1Q05722 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Col9a1Q05722 Gm18341-201ENSMUST00000197538 622 ntBASIC6.21□□□□□ -1.42
Col9a1Q05722 Gm17775-201ENSMUST00000198542 258 ntBASIC6.21□□□□□ -1.42
Col9a1Q05722 Gm43164-201ENSMUST00000202529 2128 ntBASIC6.21□□□□□ -1.42
Col9a1Q05722 Gm18320-201ENSMUST00000211304 595 ntBASIC6.21□□□□□ -1.42
Col9a1Q05722 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.21□□□□□ -1.42
Col9a1Q05722 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.21□□□□□ -1.42
Col9a1Q05722 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.21□□□□□ -1.42
Col9a1Q05722 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col9a1Q05722 Gm9795-201ENSMUST00000062156 693 ntBASIC6.21□□□□□ -1.42
Col9a1Q05722 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col9a1Q05722 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col9a1Q05722 Mir181b-2-201ENSMUST00000083644 89 ntBASIC6.21□□□□□ -1.42
Col9a1Q05722 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col9a1Q05722 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Col9a1Q05722 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col9a1Q05722 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Col9a1Q05722 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col9a1Q05722 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC6.21□□□□□ -1.42
Col9a1Q05722 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col9a1Q05722 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC6.21□□□□□ -1.42
Col9a1Q05722 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col9a1Q05722 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Col9a1Q05722 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Col9a1Q05722 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.21□□□□□ -1.42
Col9a1Q05722 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col9a1Q05722 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col9a1Q05722 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Col9a1Q05722 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col9a1Q05722 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col9a1Q05722 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col9a1Q05722 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col9a1Q05722 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col9a1Q05722 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.2□□□□□ -1.42
Col9a1Q05722 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col9a1Q05722 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
Col9a1Q05722 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC6.2□□□□□ -1.42
Col9a1Q05722 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col9a1Q05722 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col9a1Q05722 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col9a1Q05722 Gm25914-201ENSMUST00000157618 153 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 139 ms