Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a1Q04857 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col6a1Q04857 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Col6a1Q04857 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col6a1Q04857 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col6a1Q04857 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a1Q04857 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a1Q04857 AC160115.1-201ENSMUST00000224678 1574 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Col6a1Q04857 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm44708-201ENSMUST00000205580 2237 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm26396-201ENSMUST00000104093 132 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm14385-201ENSMUST00000116315 876 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm14292-201ENSMUST00000118761 456 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm14046-201ENSMUST00000119389 509 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm9225-201ENSMUST00000121921 836 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm25291-201ENSMUST00000122795 144 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm26098-201ENSMUST00000157247 288 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm26354-201ENSMUST00000158221 129 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col6a1Q04857 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm23872-201ENSMUST00000175432 77 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm27037-201ENSMUST00000182270 960 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 Mir6907-201ENSMUST00000183764 71 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm28069-201ENSMUST00000189926 214 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 Ighv3-7-201ENSMUST00000193370 348 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm38040-201ENSMUST00000193505 225 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm44060-201ENSMUST00000204440 410 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm18487-201ENSMUST00000215826 878 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 AC109180.1-201ENSMUST00000218676 398 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm32526-201ENSMUST00000221878 981 ntBASIC5.81□□□□□ -1.48
Col6a1Q04857 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col6a1Q04857 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a1Q04857 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col6a1Q04857 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a1Q04857 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Col6a1Q04857 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a1Q04857 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.81□□□□□ -1.48
Col6a1Q04857 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col6a1Q04857 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col6a1Q04857 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col6a1Q04857 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.8□□□□□ -1.48
Col6a1Q04857 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a1Q04857 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a1Q04857 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a1Q04857 Gm24170-201ENSMUST00000104124 133 ntBASIC5.8□□□□□ -1.48
Col6a1Q04857 Gm15333-201ENSMUST00000118825 364 ntBASIC5.8□□□□□ -1.48
Col6a1Q04857 Gm14128-201ENSMUST00000119514 1011 ntBASIC5.8□□□□□ -1.48
Col6a1Q04857 Gm25292-201ENSMUST00000122797 322 ntBASIC5.8□□□□□ -1.48
Col6a1Q04857 Gm22819-201ENSMUST00000157445 303 ntBASIC5.8□□□□□ -1.48
Col6a1Q04857 Gm22916-201ENSMUST00000157616 119 ntBASIC5.8□□□□□ -1.48
Col6a1Q04857 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col6a1Q04857 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC5.8□□□□□ -1.48
Col6a1Q04857 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC5.8□□□□□ -1.48
Col6a1Q04857 Gm24810-201ENSMUST00000175317 70 ntBASIC5.8□□□□□ -1.48
Col6a1Q04857 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC5.8□□□□□ -1.48
Col6a1Q04857 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a1Q04857 Gm27387-201ENSMUST00000184583 116 ntBASIC5.8□□□□□ -1.48
Col6a1Q04857 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC5.8□□□□□ -1.48
Col6a1Q04857 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.8□□□□□ -1.48
Col6a1Q04857 Gm43976-201ENSMUST00000203637 235 ntBASIC5.8□□□□□ -1.48
Col6a1Q04857 Gm44687-201ENSMUST00000204975 235 ntBASIC5.8□□□□□ -1.48
Col6a1Q04857 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC5.8□□□□□ -1.48
Col6a1Q04857 Gm45049-201ENSMUST00000207586 591 ntBASIC5.8□□□□□ -1.48
Col6a1Q04857 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.8□□□□□ -1.48
Col6a1Q04857 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a1Q04857 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col6a1Q04857 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col6a1Q04857 Snora30-201ENSMUST00000083325 130 ntBASIC5.8□□□□□ -1.48
Col6a1Q04857 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a1Q04857 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
Col6a1Q04857 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col6a1Q04857 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.8□□□□□ -1.48
Col6a1Q04857 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col6a1Q04857 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col6a1Q04857 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col6a1Q04857 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a1Q04857 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a1Q04857 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col6a1Q04857 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a1Q04857 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.8□□□□□ -1.48
Col6a1Q04857 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.79□□□□□ -1.48
Col6a1Q04857 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a1Q04857 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.79□□□□□ -1.48
Col6a1Q04857 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a1Q04857 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms