Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.55□□□□□ -1.84
HttP42859 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HttP42859 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC3.55□□□□□ -1.84
HttP42859 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC3.55□□□□□ -1.84
HttP42859 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
HttP42859 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HttP42859 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
HttP42859 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
HttP42859 Gm5066-201ENSMUST00000188479 822 ntBASIC3.55□□□□□ -1.84
HttP42859 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.55□□□□□ -1.84
HttP42859 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HttP42859 Gm43872-201ENSMUST00000203218 2213 ntBASIC3.55□□□□□ -1.84
HttP42859 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HttP42859 Gm23803-201ENSMUST00000104610 132 ntBASIC3.55□□□□□ -1.84
HttP42859 Gm15180-201ENSMUST00000117745 492 ntBASIC3.55□□□□□ -1.84
HttP42859 Gm14943-201ENSMUST00000118056 546 ntBASIC3.55□□□□□ -1.84
HttP42859 Gm13167-201ENSMUST00000118554 578 ntBASIC3.55□□□□□ -1.84
HttP42859 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC3.55□□□□□ -1.84
HttP42859 Gm26061-201ENSMUST00000175584 108 ntBASIC3.55□□□□□ -1.84
HttP42859 Gm4859-201ENSMUST00000199625 787 ntBASIC3.55□□□□□ -1.84
HttP42859 Gm18617-201ENSMUST00000222311 259 ntBASIC3.55□□□□□ -1.84
HttP42859 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.55□□□□□ -1.84
HttP42859 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HttP42859 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HttP42859 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HttP42859 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HttP42859 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC3.54□□□□□ -1.84
HttP42859 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
HttP42859 Gm9427-201ENSMUST00000116187 651 ntBASIC3.54□□□□□ -1.84
HttP42859 Gm3757-201ENSMUST00000125878 675 ntBASIC3.54□□□□□ -1.84
HttP42859 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HttP42859 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
HttP42859 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HttP42859 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
HttP42859 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HttP42859 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
HttP42859 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HttP42859 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
HttP42859 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.54□□□□□ -1.84
HttP42859 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HttP42859 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HttP42859 Gm12667-201ENSMUST00000118299 1332 ntBASIC3.54□□□□□ -1.84
HttP42859 Gm12787-201ENSMUST00000119234 396 ntBASIC3.54□□□□□ -1.84
HttP42859 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HttP42859 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC3.54□□□□□ -1.84
HttP42859 Gm29038-201ENSMUST00000191543 678 ntBASIC3.54□□□□□ -1.84
HttP42859 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HttP42859 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.54□□□□□ -1.84
HttP42859 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HttP42859 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HttP42859 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HttP42859 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.53□□□□□ -1.84
HttP42859 Gm336-201ENSMUST00000186376 1480 ntBASIC3.53□□□□□ -1.84
HttP42859 Gm5943-201ENSMUST00000119458 459 ntBASIC3.53□□□□□ -1.84
HttP42859 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.53□□□□□ -1.84
HttP42859 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HttP42859 Gm43227-201ENSMUST00000202239 677 ntBASIC3.53□□□□□ -1.84
HttP42859 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC3.53□□□□□ -1.84
HttP42859 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.53□□□□□ -1.84
HttP42859 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HttP42859 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HttP42859 Gm11881-201ENSMUST00000119408 572 ntBASIC3.53□□□□□ -1.84
HttP42859 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.53□□□□□ -1.84
HttP42859 Gm26477-201ENSMUST00000122617 323 ntBASIC3.53□□□□□ -1.84
HttP42859 Gm24914-201ENSMUST00000157285 313 ntBASIC3.53□□□□□ -1.84
HttP42859 Gm17063-201ENSMUST00000168135 456 ntBASIC3.53□□□□□ -1.84
HttP42859 Gm23162-201ENSMUST00000175081 121 ntBASIC3.53□□□□□ -1.84
HttP42859 Gm25642-201ENSMUST00000175137 66 ntBASIC3.53□□□□□ -1.84
HttP42859 Gm28900-201ENSMUST00000185232 156 ntBASIC3.53□□□□□ -1.84
HttP42859 Gm43899-201ENSMUST00000203675 246 ntBASIC3.53□□□□□ -1.84
HttP42859 AC122397.2-201ENSMUST00000227422 686 ntBASIC3.53□□□□□ -1.84
HttP42859 Gm25134-201ENSMUST00000082646 160 ntBASIC3.53□□□□□ -1.84
HttP42859 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.53□□□□□ -1.84
HttP42859 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HttP42859 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HttP42859 Gm18719-201ENSMUST00000196696 1413 ntBASIC3.53□□□□□ -1.84
HttP42859 Gm13692-201ENSMUST00000120774 371 ntBASIC3.53□□□□□ -1.85
HttP42859 Gm11229-201ENSMUST00000121993 437 ntBASIC3.53□□□□□ -1.85
HttP42859 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.53□□□□□ -1.85
HttP42859 Gm23257-201ENSMUST00000158322 132 ntBASIC3.53□□□□□ -1.85
HttP42859 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC3.53□□□□□ -1.85
HttP42859 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.53□□□□□ -1.85
HttP42859 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.53□□□□□ -1.85
HttP42859 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC3.53□□□□□ -1.85
HttP42859 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HttP42859 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HttP42859 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HttP42859 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HttP42859 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HttP42859 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
HttP42859 Gm13924-201ENSMUST00000119899 486 ntBASIC3.52□□□□□ -1.85
HttP42859 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HttP42859 Ighv8-1-201ENSMUST00000194897 291 ntBASIC3.52□□□□□ -1.85
HttP42859 Gm5176-202ENSMUST00000220267 583 ntBASIC3.52□□□□□ -1.85
HttP42859 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC3.52□□□□□ -1.85
HttP42859 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HttP42859 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
HttP42859 Gm28240-201ENSMUST00000187560 2053 ntBASIC3.52□□□□□ -1.85
HttP42859 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HttP42859 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms