Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm21815-201ENSMUST00000178213 664 ntBASIC4.84□□□□□ -1.63
LdlrP35951 Gm25944-201ENSMUST00000178758 94 ntBASIC4.84□□□□□ -1.63
LdlrP35951 Gm28094-201ENSMUST00000185262 390 ntBASIC4.84□□□□□ -1.63
LdlrP35951 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LdlrP35951 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC4.84□□□□□ -1.63
LdlrP35951 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC4.84□□□□□ -1.63
LdlrP35951 Gm36998-201ENSMUST00000193205 704 ntBASIC4.84□□□□□ -1.63
LdlrP35951 Gm38019-201ENSMUST00000195133 380 ntBASIC4.84□□□□□ -1.63
LdlrP35951 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.84□□□□□ -1.63
LdlrP35951 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.84□□□□□ -1.63
LdlrP35951 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
LdlrP35951 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.84□□□□□ -1.63
LdlrP35951 Gm29785-201ENSMUST00000217033 383 ntBASIC4.84□□□□□ -1.63
LdlrP35951 AC139638.1-201ENSMUST00000218027 364 ntBASIC4.84□□□□□ -1.63
LdlrP35951 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC4.84□□□□□ -1.63
LdlrP35951 Gm7530-201ENSMUST00000218466 605 ntBASIC4.84□□□□□ -1.63
LdlrP35951 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC4.84□□□□□ -1.63
LdlrP35951 AC122465.3-201ENSMUST00000221644 355 ntBASIC4.84□□□□□ -1.63
LdlrP35951 AC153662.1-201ENSMUST00000222220 270 ntBASIC4.84□□□□□ -1.63
LdlrP35951 AC173481.1-201ENSMUST00000223351 270 ntBASIC4.84□□□□□ -1.63
LdlrP35951 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LdlrP35951 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.84□□□□□ -1.63
LdlrP35951 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
LdlrP35951 Gm23302-201ENSMUST00000082710 100 ntBASIC4.84□□□□□ -1.63
LdlrP35951 Gm22810-201ENSMUST00000082741 158 ntBASIC4.84□□□□□ -1.63
LdlrP35951 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.84□□□□□ -1.63
LdlrP35951 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
LdlrP35951 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.84□□□□□ -1.63
LdlrP35951 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LdlrP35951 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LdlrP35951 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.64
LdlrP35951 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LdlrP35951 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LdlrP35951 Gm37174-201ENSMUST00000194699 3058 ntBASIC4.83□□□□□ -1.64
LdlrP35951 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.83□□□□□ -1.64
LdlrP35951 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LdlrP35951 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
LdlrP35951 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LdlrP35951 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
LdlrP35951 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.83□□□□□ -1.64
LdlrP35951 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LdlrP35951 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.83□□□□□ -1.64
LdlrP35951 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
LdlrP35951 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
LdlrP35951 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
LdlrP35951 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC4.83□□□□□ -1.64
LdlrP35951 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
LdlrP35951 Gm12016-201ENSMUST00000119079 681 ntBASIC4.83□□□□□ -1.64
LdlrP35951 Gm7071-201ENSMUST00000120458 462 ntBASIC4.83□□□□□ -1.64
LdlrP35951 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC4.83□□□□□ -1.64
LdlrP35951 Gm12578-201ENSMUST00000121244 417 ntBASIC4.83□□□□□ -1.64
LdlrP35951 Gm13149-201ENSMUST00000122071 339 ntBASIC4.83□□□□□ -1.64
LdlrP35951 Mir1947-201ENSMUST00000158235 85 ntBASIC4.83□□□□□ -1.64
LdlrP35951 Gm24225-201ENSMUST00000158825 98 ntBASIC4.83□□□□□ -1.64
LdlrP35951 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
LdlrP35951 Trbv10-201ENSMUST00000168322 289 ntBASIC4.83□□□□□ -1.64
LdlrP35951 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC4.83□□□□□ -1.64
LdlrP35951 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.83□□□□□ -1.64
LdlrP35951 Mir496b-201ENSMUST00000184935 113 ntBASIC4.83□□□□□ -1.64
LdlrP35951 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC4.83□□□□□ -1.64
LdlrP35951 Gm28116-201ENSMUST00000189064 387 ntBASIC4.83□□□□□ -1.64
LdlrP35951 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC4.83□□□□□ -1.64
LdlrP35951 Gm43513-201ENSMUST00000199779 1076 ntBASIC4.83□□□□□ -1.64
LdlrP35951 Gm44989-201ENSMUST00000204749 217 ntBASIC4.83□□□□□ -1.64
LdlrP35951 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.83□□□□□ -1.64
LdlrP35951 Olfr936-202ENSMUST00000216912 937 ntBASIC4.83□□□□□ -1.64
LdlrP35951 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC4.83□□□□□ -1.64
LdlrP35951 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC4.83□□□□□ -1.64
LdlrP35951 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.83□□□□□ -1.64
LdlrP35951 AC160999.1-201ENSMUST00000225675 810 ntBASIC4.83□□□□□ -1.64
LdlrP35951 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LdlrP35951 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LdlrP35951 Gm24043-201ENSMUST00000083108 116 ntBASIC4.83□□□□□ -1.64
LdlrP35951 n-R5s27-201ENSMUST00000093699 119 ntBASIC4.83□□□□□ -1.64
LdlrP35951 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LdlrP35951 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LdlrP35951 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LdlrP35951 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LdlrP35951 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LdlrP35951 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LdlrP35951 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LdlrP35951 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.83□□□□□ -1.64
LdlrP35951 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LdlrP35951 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LdlrP35951 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LdlrP35951 Gm37630-201ENSMUST00000194210 1456 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LdlrP35951 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LdlrP35951 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LdlrP35951 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LdlrP35951 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.82□□□□□ -1.64
LdlrP35951 Gm24273-201ENSMUST00000102332 164 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LdlrP35951 Gm25418-201ENSMUST00000104214 129 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Gm3940-201ENSMUST00000105087 432 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Gm13349-201ENSMUST00000118436 411 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Gm14901-201ENSMUST00000119001 283 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Gm13711-201ENSMUST00000119708 453 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms