Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pde6bP23440 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pde6bP23440 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pde6bP23440 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pde6bP23440 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pde6bP23440 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pde6bP23440 Gm24079-201ENSMUST00000104352 132 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Gm22021-201ENSMUST00000104353 107 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Mir883a-201ENSMUST00000104824 76 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Gm14364-201ENSMUST00000129209 267 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.89□□□□□ -1.47
Pde6bP23440 Gm25383-201ENSMUST00000157810 144 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Gm26170-201ENSMUST00000158419 148 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Mir5103-201ENSMUST00000175111 79 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Gm25314-201ENSMUST00000178810 79 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Gm27037-201ENSMUST00000182270 960 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Pde6bP23440 Gm37421-201ENSMUST00000193088 132 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Gm37882-201ENSMUST00000195254 196 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Gm36985-201ENSMUST00000195595 379 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Pde6bP23440 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC5.89□□□□□ -1.47
Pde6bP23440 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Pde6bP23440 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.89□□□□□ -1.47
Pde6bP23440 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.89□□□□□ -1.47
Pde6bP23440 Gm44274-201ENSMUST00000203417 256 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Gm19252-201ENSMUST00000204705 305 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Gm18120-201ENSMUST00000220079 511 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Pde6bP23440 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Pde6bP23440 Gm23627-201ENSMUST00000082459 107 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Gm22502-201ENSMUST00000082488 107 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Gm24149-201ENSMUST00000082757 107 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Gm23514-201ENSMUST00000082827 130 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Gm25401-201ENSMUST00000082975 106 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Gm24763-201ENSMUST00000083688 190 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Pde6bP23440 Gm3616-201ENSMUST00000174430 2514 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Gm3683-201ENSMUST00000175701 2513 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
Pde6bP23440 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pde6bP23440 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.89□□□□□ -1.47
Pde6bP23440 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Pde6bP23440 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Pde6bP23440 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pde6bP23440 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pde6bP23440 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pde6bP23440 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Pde6bP23440 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pde6bP23440 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Pde6bP23440 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pde6bP23440 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Pde6bP23440 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm14874-201ENSMUST00000118995 438 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm13804-201ENSMUST00000119552 172 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm15387-201ENSMUST00000120421 648 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm12340-201ENSMUST00000121617 462 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.88□□□□□ -1.47
Pde6bP23440 Gm24419-201ENSMUST00000157875 332 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm24729-201ENSMUST00000158225 137 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm3030-201ENSMUST00000163410 516 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm17538-201ENSMUST00000168236 327 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Pde6bP23440 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm29231-201ENSMUST00000179850 319 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Pde6bP23440 Gm24306-201ENSMUST00000180229 79 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm27543-201ENSMUST00000183562 177 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm27676-201ENSMUST00000183669 61 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm28976-201ENSMUST00000188070 144 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC5.88□□□□□ -1.47
Pde6bP23440 Gm5842-201ENSMUST00000195073 622 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm43043-201ENSMUST00000196579 412 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm43083-201ENSMUST00000199594 476 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm44611-201ENSMUST00000207507 355 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pde6bP23440 AC132437.1-201ENSMUST00000218308 320 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 AC153141.1-201ENSMUST00000218636 501 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pde6bP23440 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC5.88□□□□□ -1.47
Pde6bP23440 Gm4963-201ENSMUST00000072718 378 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Pde6bP23440 Gm22456-201ENSMUST00000082578 125 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm26206-201ENSMUST00000082908 110 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm22572-201ENSMUST00000082985 105 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Mir30b-201ENSMUST00000083542 96 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm23733-201ENSMUST00000083750 106 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm5518-201ENSMUST00000084171 648 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pde6bP23440 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
Pde6bP23440 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.88□□□□□ -1.47
Pde6bP23440 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pde6bP23440 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms