Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Cdx1P18111 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Cdx1P18111 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Cdx1P18111 Gm2092-201ENSMUST00000178887 639 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Cdx1P18111 Gm2759-201ENSMUST00000179938 639 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Gm19200-201ENSMUST00000182579 1001 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Mir6907-201ENSMUST00000183764 71 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Gm4854-201ENSMUST00000185902 574 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC3.38□□□□□ -1.87
Cdx1P18111 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC3.38□□□□□ -1.87
Cdx1P18111 Gm38088-201ENSMUST00000195829 241 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Gm44474-201ENSMUST00000196525 127 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Gm43730-201ENSMUST00000199863 372 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.38□□□□□ -1.87
Cdx1P18111 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 AC073947.1-201ENSMUST00000216991 649 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC3.38□□□□□ -1.87
Cdx1P18111 AL589696.1-201ENSMUST00000225711 330 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cdx1P18111 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Cdx1P18111 Gm23464-201ENSMUST00000083145 147 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cdx1P18111 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Cdx1P18111 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Cdx1P18111 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Cdx1P18111 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cdx1P18111 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Cdx1P18111 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cdx1P18111 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.38□□□□□ -1.87
Cdx1P18111 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cdx1P18111 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.38□□□□□ -1.87
Cdx1P18111 AC154184.1-201ENSMUST00000224375 1620 ntBASIC3.37□□□□□ -1.87
Cdx1P18111 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Cdx1P18111 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cdx1P18111 Gm12467-201ENSMUST00000117625 745 ntBASIC3.37□□□□□ -1.87
Cdx1P18111 Gm15058-201ENSMUST00000117689 458 ntBASIC3.37□□□□□ -1.87
Cdx1P18111 Gm14795-201ENSMUST00000118461 471 ntBASIC3.37□□□□□ -1.87
Cdx1P18111 Gm9308-201ENSMUST00000119073 448 ntBASIC3.37□□□□□ -1.87
Cdx1P18111 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Cdx1P18111 Gm5060-201ENSMUST00000120072 599 ntBASIC3.37□□□□□ -1.87
Cdx1P18111 Gm16471-201ENSMUST00000121940 618 ntBASIC3.37□□□□□ -1.87
Cdx1P18111 Defa-ps12-201ENSMUST00000122353 193 ntBASIC3.37□□□□□ -1.87
Cdx1P18111 Gm16250-201ENSMUST00000148974 256 ntBASIC3.37□□□□□ -1.87
Cdx1P18111 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.37□□□□□ -1.87
Cdx1P18111 Gm23167-201ENSMUST00000157155 103 ntBASIC3.37□□□□□ -1.87
Cdx1P18111 Gm23824-201ENSMUST00000158741 276 ntBASIC3.37□□□□□ -1.87
Cdx1P18111 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.37□□□□□ -1.87
Cdx1P18111 Gm27477-201ENSMUST00000184649 143 ntBASIC3.37□□□□□ -1.87
Cdx1P18111 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Cdx1P18111 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.37□□□□□ -1.87
Cdx1P18111 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Cdx1P18111 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.37□□□□□ -1.87
Cdx1P18111 Gm37636-201ENSMUST00000193583 359 ntBASIC3.37□□□□□ -1.87
Cdx1P18111 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC3.37□□□□□ -1.87
Cdx1P18111 Gm43774-201ENSMUST00000196327 878 ntBASIC3.37□□□□□ -1.87
Cdx1P18111 Gm2314-201ENSMUST00000200391 586 ntBASIC3.37□□□□□ -1.87
Cdx1P18111 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC3.37□□□□□ -1.87
Cdx1P18111 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC3.37□□□□□ -1.87
Cdx1P18111 Gm33626-201ENSMUST00000206790 828 ntBASIC3.37□□□□□ -1.87
Cdx1P18111 Gm45247-201ENSMUST00000210757 309 ntBASIC3.37□□□□□ -1.87
Cdx1P18111 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC3.37□□□□□ -1.87
Cdx1P18111 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC3.37□□□□□ -1.87
Cdx1P18111 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.37□□□□□ -1.87
Cdx1P18111 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.37□□□□□ -1.87
Cdx1P18111 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.37□□□□□ -1.87
Cdx1P18111 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Cdx1P18111 Gm24611-201ENSMUST00000083272 107 ntBASIC3.37□□□□□ -1.87
Cdx1P18111 Gm23099-201ENSMUST00000083454 139 ntBASIC3.37□□□□□ -1.87
Cdx1P18111 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Cdx1P18111 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cdx1P18111 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Cdx1P18111 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Cdx1P18111 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cdx1P18111 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Cdx1P18111 Gm37764-201ENSMUST00000194664 2150 ntBASIC3.36□□□□□ -1.87
Cdx1P18111 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Cdx1P18111 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Cdx1P18111 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC3.36□□□□□ -1.87
Cdx1P18111 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Cdx1P18111 Gm5943-201ENSMUST00000119458 459 ntBASIC3.36□□□□□ -1.87
Cdx1P18111 Gm12739-201ENSMUST00000119769 382 ntBASIC3.36□□□□□ -1.87
Cdx1P18111 Gm15157-201ENSMUST00000121852 702 ntBASIC3.36□□□□□ -1.87
Cdx1P18111 Gm14903-201ENSMUST00000122435 537 ntBASIC3.36□□□□□ -1.87
Cdx1P18111 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Cdx1P18111 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Cdx1P18111 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.36□□□□□ -1.87
Cdx1P18111 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC3.36□□□□□ -1.87
Cdx1P18111 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC3.36□□□□□ -1.87
Cdx1P18111 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC3.36□□□□□ -1.87
Cdx1P18111 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.36□□□□□ -1.87
Cdx1P18111 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.36□□□□□ -1.87
Cdx1P18111 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC3.36□□□□□ -1.87
Cdx1P18111 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.36□□□□□ -1.87
Cdx1P18111 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC3.36□□□□□ -1.87
Cdx1P18111 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Cdx1P18111 Gm44665-201ENSMUST00000205381 251 ntBASIC3.36□□□□□ -1.87
Cdx1P18111 Gm44857-201ENSMUST00000208331 196 ntBASIC3.36□□□□□ -1.87
Cdx1P18111 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Cdx1P18111 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms