Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC4.05□□□□□ -1.76
Col1a1P11087 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Col1a1P11087 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col1a1P11087 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Col1a1P11087 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col1a1P11087 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Col1a1P11087 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.04□□□□□ -1.76
Col1a1P11087 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col1a1P11087 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col1a1P11087 AC192333.5-201ENSMUST00000224620 2350 ntBASIC4.04□□□□□ -1.76
Col1a1P11087 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Col1a1P11087 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col1a1P11087 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col1a1P11087 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Col1a1P11087 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.04□□□□□ -1.76
Col1a1P11087 Gm24734-201ENSMUST00000158860 262 ntBASIC4.04□□□□□ -1.76
Col1a1P11087 Gm7870-201ENSMUST00000184467 616 ntBASIC4.04□□□□□ -1.76
Col1a1P11087 Gm28113-201ENSMUST00000188280 229 ntBASIC4.04□□□□□ -1.76
Col1a1P11087 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.04□□□□□ -1.76
Col1a1P11087 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.04□□□□□ -1.76
Col1a1P11087 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col1a1P11087 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col1a1P11087 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Col1a1P11087 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Col1a1P11087 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col1a1P11087 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col1a1P11087 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Col1a1P11087 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Col1a1P11087 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col1a1P11087 Gm24119-201ENSMUST00000103979 246 ntBASIC4.03□□□□□ -1.76
Col1a1P11087 Gm15466-201ENSMUST00000122299 333 ntBASIC4.03□□□□□ -1.76
Col1a1P11087 Gm22538-201ENSMUST00000158169 299 ntBASIC4.03□□□□□ -1.76
Col1a1P11087 Gm24675-201ENSMUST00000158757 259 ntBASIC4.03□□□□□ -1.76
Col1a1P11087 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC4.03□□□□□ -1.76
Col1a1P11087 Gm24019-201ENSMUST00000178620 107 ntBASIC4.03□□□□□ -1.76
Col1a1P11087 Gm26243-201ENSMUST00000179260 107 ntBASIC4.03□□□□□ -1.76
Col1a1P11087 Gm27783-201ENSMUST00000183534 105 ntBASIC4.03□□□□□ -1.76
Col1a1P11087 AC132384.13-201ENSMUST00000219556 1159 ntBASIC4.03□□□□□ -1.76
Col1a1P11087 AC115750.1-201ENSMUST00000220441 567 ntBASIC4.03□□□□□ -1.76
Col1a1P11087 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Col1a1P11087 AC091783.4-201ENSMUST00000224940 611 ntBASIC4.03□□□□□ -1.76
Col1a1P11087 AC118639.1-204ENSMUST00000226401 694 ntBASIC4.03□□□□□ -1.76
Col1a1P11087 Gm23296-201ENSMUST00000082555 107 ntBASIC4.03□□□□□ -1.76
Col1a1P11087 Gm24859-201ENSMUST00000082729 107 ntBASIC4.03□□□□□ -1.76
Col1a1P11087 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Col1a1P11087 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Col1a1P11087 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
Col1a1P11087 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Col1a1P11087 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.77
Col1a1P11087 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.77
Col1a1P11087 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col1a1P11087 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Col1a1P11087 Gm4596-201ENSMUST00000117197 442 ntBASIC4.02□□□□□ -1.77
Col1a1P11087 Gm16327-201ENSMUST00000137146 228 ntBASIC4.02□□□□□ -1.77
Col1a1P11087 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC4.02□□□□□ -1.77
Col1a1P11087 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC4.02□□□□□ -1.77
Col1a1P11087 Gm22322-201ENSMUST00000157151 111 ntBASIC4.02□□□□□ -1.77
Col1a1P11087 Gm7281-201ENSMUST00000160010 543 ntBASIC4.02□□□□□ -1.77
Col1a1P11087 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Col1a1P11087 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Col1a1P11087 Gm28282-201ENSMUST00000186072 186 ntBASIC4.02□□□□□ -1.77
Col1a1P11087 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC4.02□□□□□ -1.77
Col1a1P11087 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Col1a1P11087 Gm45513-201ENSMUST00000210228 376 ntBASIC4.02□□□□□ -1.77
Col1a1P11087 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC4.02□□□□□ -1.77
Col1a1P11087 Gm19987-201ENSMUST00000216339 499 ntBASIC4.02□□□□□ -1.77
Col1a1P11087 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC4.02□□□□□ -1.77
Col1a1P11087 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC4.02□□□□□ -1.77
Col1a1P11087 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Col1a1P11087 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Col1a1P11087 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Col1a1P11087 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col1a1P11087 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Col1a1P11087 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col1a1P11087 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col1a1P11087 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Col1a1P11087 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Col1a1P11087 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col1a1P11087 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.01□□□□□ -1.77
Col1a1P11087 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC4.01□□□□□ -1.77
Col1a1P11087 Gm12268-201ENSMUST00000118398 442 ntBASIC4.01□□□□□ -1.77
Col1a1P11087 Gm16021-201ENSMUST00000121176 219 ntBASIC4.01□□□□□ -1.77
Col1a1P11087 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Col1a1P11087 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC4.01□□□□□ -1.77
Col1a1P11087 Mir6905-201ENSMUST00000184228 70 ntBASIC4.01□□□□□ -1.77
Col1a1P11087 Mir7118-201ENSMUST00000197760 61 ntBASIC4.01□□□□□ -1.77
Col1a1P11087 Gm18672-201ENSMUST00000208035 270 ntBASIC4.01□□□□□ -1.77
Col1a1P11087 Gm5176-201ENSMUST00000218244 1227 ntBASIC4.01□□□□□ -1.77
Col1a1P11087 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC4.01□□□□□ -1.77
Col1a1P11087 Gm24817-201ENSMUST00000093672 105 ntBASIC4.01□□□□□ -1.77
Col1a1P11087 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col1a1P11087 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col1a1P11087 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col1a1P11087 Gm45322-201ENSMUST00000211642 1361 ntBASIC4.01□□□□□ -1.77
Col1a1P11087 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col1a1P11087 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col1a1P11087 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC4□□□□□ -1.77
Col1a1P11087 Gm38032-201ENSMUST00000195052 1589 ntBASIC4□□□□□ -1.77
Col1a1P11087 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms