Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm17153-201ENSMUST00000171314 490 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm22177-201ENSMUST00000175002 158 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm20701-201ENSMUST00000176082 347 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm24949-201ENSMUST00000183609 215 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm28685-201ENSMUST00000187545 1101 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm28597-201ENSMUST00000187664 666 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm9443-201ENSMUST00000188406 816 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm37878-201ENSMUST00000192108 387 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm8939-201ENSMUST00000192577 964 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm37272-201ENSMUST00000193401 488 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm9236-201ENSMUST00000196892 587 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Ighv1-79-201ENSMUST00000200152 350 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 AC116465.1-201ENSMUST00000220324 235 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 AC156952.1-201ENSMUST00000220361 793 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 AC117202.1-201ENSMUST00000227007 445 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 AC168062.2-201ENSMUST00000228907 422 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm25586-201ENSMUST00000082499 112 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Gm14981-201ENSMUST00000117325 943 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Gm14413-201ENSMUST00000122158 408 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Gm22958-201ENSMUST00000122512 184 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Gm23212-201ENSMUST00000122718 60 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Gm23906-201ENSMUST00000157573 128 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Gm25913-201ENSMUST00000157617 135 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Mir6344-201ENSMUST00000183462 104 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Gm18667-201ENSMUST00000186523 484 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Gm28414-201ENSMUST00000190111 294 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Gm28872-201ENSMUST00000191518 158 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Gm8874-201ENSMUST00000196826 286 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 AC118733.1-201ENSMUST00000217387 1217 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 AC124399.1-201ENSMUST00000218334 590 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Gm7034-201ENSMUST00000218638 645 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Gm19074-201ENSMUST00000218915 1429 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.29□□□□□ -1.56
Ushbp1Q8R370 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm37329-201ENSMUST00000192973 2057 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm44321-201ENSMUST00000204262 2855 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm44860-201ENSMUST00000208473 2346 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm12102-201ENSMUST00000118251 604 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm13865-201ENSMUST00000120957 865 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm25292-201ENSMUST00000122797 322 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms