Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 AC121844.3-201ENSMUST00000219124 1785 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm25915-201ENSMUST00000104265 126 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm11200-201ENSMUST00000121698 448 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm8980-201ENSMUST00000140232 2197 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm23169-201ENSMUST00000157157 112 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm8161-201ENSMUST00000168739 481 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm26960-201ENSMUST00000182263 412 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm28283-201ENSMUST00000185509 178 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm29512-201ENSMUST00000185544 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm28110-201ENSMUST00000185782 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm28838-201ENSMUST00000186338 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm29057-201ENSMUST00000186468 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm29661-201ENSMUST00000186781 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm28737-201ENSMUST00000186808 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm29118-201ENSMUST00000186908 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm28433-201ENSMUST00000187085 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm29635-201ENSMUST00000187221 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm28759-201ENSMUST00000187621 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm28831-201ENSMUST00000187739 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm28200-201ENSMUST00000187778 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm29026-201ENSMUST00000187787 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm28752-201ENSMUST00000188340 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm28797-201ENSMUST00000188543 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm28855-201ENSMUST00000188680 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm29378-201ENSMUST00000188723 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm28569-201ENSMUST00000188748 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm28120-201ENSMUST00000188812 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm28369-201ENSMUST00000188993 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm29037-201ENSMUST00000189092 313 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm28909-201ENSMUST00000189406 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm28705-201ENSMUST00000189548 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm28861-201ENSMUST00000189681 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm29180-201ENSMUST00000190003 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm28939-201ENSMUST00000190351 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm28223-201ENSMUST00000190469 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm29575-201ENSMUST00000190597 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm29092-201ENSMUST00000190768 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm29469-201ENSMUST00000191448 315 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 AC136146.1-201ENSMUST00000196180 91 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm44543-201ENSMUST00000209136 396 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm9685-201ENSMUST00000211275 538 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 AL669916.5-201ENSMUST00000214874 361 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 AC159244.1-201ENSMUST00000220964 594 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 AC164297.1-201ENSMUST00000224484 1561 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 AC154627.3-201ENSMUST00000228441 334 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm6104-201ENSMUST00000078030 603 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim47Q8C0E3 AC132852.1-201ENSMUST00000214683 2324 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Gm14857-201ENSMUST00000117862 3185 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Gm14013-201ENSMUST00000119006 270 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Gm12732-201ENSMUST00000121688 180 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Gm24289-201ENSMUST00000157629 135 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Gm25906-201ENSMUST00000158489 126 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Gm23704-201ENSMUST00000158844 340 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms