Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Trim35Q8C006 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim35Q8C006 Gm37762-201ENSMUST00000194515 3561 ntBASIC7.2□□□□□ -1.26
Trim35Q8C006 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim35Q8C006 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim35Q8C006 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim35Q8C006 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim35Q8C006 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim35Q8C006 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim35Q8C006 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Trim35Q8C006 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC7.2□□□□□ -1.26
Trim35Q8C006 CT025619.3-201ENSMUST00000216299 3267 ntBASIC7.2□□□□□ -1.26
Trim35Q8C006 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC7.2□□□□□ -1.26
Trim35Q8C006 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim35Q8C006 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim35Q8C006 Gm7265-201ENSMUST00000192735 3502 ntBASIC7.2□□□□□ -1.26
Trim35Q8C006 Gm42763-201ENSMUST00000199595 2087 ntBASIC7.2□□□□□ -1.26
Trim35Q8C006 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim35Q8C006 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim35Q8C006 Gm43527-201ENSMUST00000198749 3178 ntBASIC7.2□□□□□ -1.26
Trim35Q8C006 Gm5762-201ENSMUST00000119204 258 ntBASIC7.2□□□□□ -1.26
Trim35Q8C006 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC7.2□□□□□ -1.26
Trim35Q8C006 Gm15349-201ENSMUST00000121154 204 ntBASIC7.2□□□□□ -1.26
Trim35Q8C006 Trav8-2-201ENSMUST00000130122 337 ntBASIC7.2□□□□□ -1.26
Trim35Q8C006 Gm25054-201ENSMUST00000157370 97 ntBASIC7.2□□□□□ -1.26
Trim35Q8C006 Gm22915-201ENSMUST00000157615 136 ntBASIC7.2□□□□□ -1.26
Trim35Q8C006 Gm26357-201ENSMUST00000158218 115 ntBASIC7.2□□□□□ -1.26
Trim35Q8C006 Gm9285-201ENSMUST00000177691 697 ntBASIC7.2□□□□□ -1.26
Trim35Q8C006 Gm38022-201ENSMUST00000191762 403 ntBASIC7.2□□□□□ -1.26
Trim35Q8C006 Gm37682-201ENSMUST00000191776 522 ntBASIC7.2□□□□□ -1.26
Trim35Q8C006 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC7.2□□□□□ -1.26
Trim35Q8C006 AC153505.2-201ENSMUST00000217741 277 ntBASIC7.2□□□□□ -1.26
Trim35Q8C006 AC122242.1-201ENSMUST00000224650 304 ntBASIC7.2□□□□□ -1.26
Trim35Q8C006 Gm6462-201ENSMUST00000081488 304 ntBASIC7.2□□□□□ -1.26
Trim35Q8C006 Mir484-201ENSMUST00000093566 67 ntBASIC7.2□□□□□ -1.26
Trim35Q8C006 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim35Q8C006 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim35Q8C006 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim35Q8C006 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim35Q8C006 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim35Q8C006 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim35Q8C006 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Trim35Q8C006 Gm45876-201ENSMUST00000212698 2709 ntBASIC7.2□□□□□ -1.26
Trim35Q8C006 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim35Q8C006 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Trim35Q8C006 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
Trim35Q8C006 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC7.19□□□□□ -1.26
Trim35Q8C006 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC7.19□□□□□ -1.26
Trim35Q8C006 Gm37006-201ENSMUST00000195253 2674 ntBASIC7.19□□□□□ -1.26
Trim35Q8C006 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trim35Q8C006 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC7.19□□□□□ -1.26
Trim35Q8C006 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC7.19□□□□□ -1.26
Trim35Q8C006 Gm38212-201ENSMUST00000194081 2756 ntBASIC7.19□□□□□ -1.26
Trim35Q8C006 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trim35Q8C006 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim35Q8C006 Gm22148-201ENSMUST00000104445 107 ntBASIC7.19□□□□□ -1.26
Trim35Q8C006 Gm2178-201ENSMUST00000104927 357 ntBASIC7.19□□□□□ -1.26
Trim35Q8C006 Gm15016-201ENSMUST00000117300 720 ntBASIC7.19□□□□□ -1.26
Trim35Q8C006 Gm15313-201ENSMUST00000119179 282 ntBASIC7.19□□□□□ -1.26
Trim35Q8C006 Gm8916-201ENSMUST00000119732 949 ntBASIC7.19□□□□□ -1.26
Trim35Q8C006 Defa-ps8-201ENSMUST00000120972 279 ntBASIC7.19□□□□□ -1.26
Trim35Q8C006 Gm4916-201ENSMUST00000126139 642 ntBASIC7.19□□□□□ -1.26
Trim35Q8C006 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim35Q8C006 Mir3078-201ENSMUST00000175231 87 ntBASIC7.19□□□□□ -1.26
Trim35Q8C006 Gm27373-201ENSMUST00000184017 184 ntBASIC7.19□□□□□ -1.26
Trim35Q8C006 Gm27401-201ENSMUST00000184052 173 ntBASIC7.19□□□□□ -1.26
Trim35Q8C006 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim35Q8C006 Gm37601-201ENSMUST00000194922 394 ntBASIC7.19□□□□□ -1.26
Trim35Q8C006 Gm43555-201ENSMUST00000196588 310 ntBASIC7.19□□□□□ -1.26
Trim35Q8C006 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC7.19□□□□□ -1.26
Trim35Q8C006 Gm44252-201ENSMUST00000204187 330 ntBASIC7.19□□□□□ -1.26
Trim35Q8C006 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC7.19□□□□□ -1.26
Trim35Q8C006 Gm44871-201ENSMUST00000207821 497 ntBASIC7.19□□□□□ -1.26
Trim35Q8C006 Gm45101-201ENSMUST00000208327 232 ntBASIC7.19□□□□□ -1.26
Trim35Q8C006 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC7.19□□□□□ -1.26
Trim35Q8C006 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trim35Q8C006 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trim35Q8C006 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trim35Q8C006 Gm37137-201ENSMUST00000195138 2684 ntBASIC7.19□□□□□ -1.26
Trim35Q8C006 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Trim35Q8C006 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Trim35Q8C006 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Trim35Q8C006 AC154642.2-201ENSMUST00000223657 2485 ntBASIC7.19□□□□□ -1.26
Trim35Q8C006 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
Trim35Q8C006 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trim35Q8C006 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim35Q8C006 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trim35Q8C006 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC7.18□□□□□ -1.26
Trim35Q8C006 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trim35Q8C006 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim35Q8C006 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trim35Q8C006 Cmah-208ENSMUST00000224819 9482 ntBASIC7.18□□□□□ -1.26
Trim35Q8C006 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim35Q8C006 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Trim35Q8C006 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim35Q8C006 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim35Q8C006 Mir687-201ENSMUST00000102166 89 ntBASIC7.18□□□□□ -1.26
Trim35Q8C006 Gm25757-201ENSMUST00000103986 123 ntBASIC7.18□□□□□ -1.26
Trim35Q8C006 Serpina3h-202ENSMUST00000116393 1226 ntBASIC7.18□□□□□ -1.26
Trim35Q8C006 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms