Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.98□□□□□ -1.45
Trim56Q80VI1 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 AC124586.1-201ENSMUST00000221673 2795 ntBASIC5.98□□□□□ -1.45
Trim56Q80VI1 Gm42484-201ENSMUST00000196075 2104 ntBASIC5.98□□□□□ -1.45
Trim56Q80VI1 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Gm26996-201ENSMUST00000204418 1359 ntBASIC5.98□□□□□ -1.45
Trim56Q80VI1 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trim56Q80VI1 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.98□□□□□ -1.45
Trim56Q80VI1 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC5.98□□□□□ -1.45
Trim56Q80VI1 Gm22101-201ENSMUST00000157928 103 ntBASIC5.98□□□□□ -1.45
Trim56Q80VI1 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Gm15838-201ENSMUST00000161575 180 ntBASIC5.98□□□□□ -1.45
Trim56Q80VI1 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC5.98□□□□□ -1.45
Trim56Q80VI1 Gm25412-201ENSMUST00000180258 107 ntBASIC5.98□□□□□ -1.45
Trim56Q80VI1 Zfp-ps-201ENSMUST00000185025 478 ntBASIC5.98□□□□□ -1.45
Trim56Q80VI1 Gm29105-201ENSMUST00000187256 450 ntBASIC5.98□□□□□ -1.45
Trim56Q80VI1 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Gm22897-201ENSMUST00000197860 128 ntBASIC5.98□□□□□ -1.45
Trim56Q80VI1 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Gm18194-201ENSMUST00000210455 481 ntBASIC5.98□□□□□ -1.45
Trim56Q80VI1 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Gm35558-203ENSMUST00000222264 204 ntBASIC5.98□□□□□ -1.45
Trim56Q80VI1 AC122448.1-201ENSMUST00000226317 772 ntBASIC5.98□□□□□ -1.45
Trim56Q80VI1 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.98□□□□□ -1.45
Trim56Q80VI1 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.98□□□□□ -1.45
Trim56Q80VI1 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.98□□□□□ -1.45
Trim56Q80VI1 AC120375.2-201ENSMUST00000226532 1853 ntBASIC5.98□□□□□ -1.45
Trim56Q80VI1 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.98□□□□□ -1.45
Trim56Q80VI1 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trim56Q80VI1 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim56Q80VI1 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim56Q80VI1 Gm43718-201ENSMUST00000197524 1857 ntBASIC5.97□□□□□ -1.45
Trim56Q80VI1 Gm25595-201ENSMUST00000102273 97 ntBASIC5.97□□□□□ -1.45
Trim56Q80VI1 Gm14046-201ENSMUST00000119389 509 ntBASIC5.97□□□□□ -1.45
Trim56Q80VI1 Gm15480-201ENSMUST00000120442 519 ntBASIC5.97□□□□□ -1.45
Trim56Q80VI1 Gm13409-201ENSMUST00000122072 546 ntBASIC5.97□□□□□ -1.45
Trim56Q80VI1 Gm25383-201ENSMUST00000157810 144 ntBASIC5.97□□□□□ -1.45
Trim56Q80VI1 Mir5128-201ENSMUST00000175217 84 ntBASIC5.97□□□□□ -1.45
Trim56Q80VI1 Gm24757-201ENSMUST00000176987 371 ntBASIC5.97□□□□□ -1.45
Trim56Q80VI1 Gm25670-201ENSMUST00000178423 107 ntBASIC5.97□□□□□ -1.45
Trim56Q80VI1 Gm26239-201ENSMUST00000178842 107 ntBASIC5.97□□□□□ -1.45
Trim56Q80VI1 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC5.97□□□□□ -1.45
Trim56Q80VI1 Gm24267-201ENSMUST00000179841 107 ntBASIC5.97□□□□□ -1.45
Trim56Q80VI1 Gm26950-201ENSMUST00000182734 498 ntBASIC5.97□□□□□ -1.45
Trim56Q80VI1 Gm2497-201ENSMUST00000189539 601 ntBASIC5.97□□□□□ -1.45
Trim56Q80VI1 Mir6375-201ENSMUST00000197176 95 ntBASIC5.97□□□□□ -1.45
Trim56Q80VI1 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC5.97□□□□□ -1.45
Trim56Q80VI1 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim56Q80VI1 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC5.97□□□□□ -1.45
Trim56Q80VI1 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.97□□□□□ -1.45
Trim56Q80VI1 AC124489.2-201ENSMUST00000223930 589 ntBASIC5.97□□□□□ -1.45
Trim56Q80VI1 Gm24622-201ENSMUST00000082619 162 ntBASIC5.97□□□□□ -1.45
Trim56Q80VI1 Gm24460-201ENSMUST00000082731 106 ntBASIC5.97□□□□□ -1.45
Trim56Q80VI1 Gm24292-201ENSMUST00000082888 107 ntBASIC5.97□□□□□ -1.45
Trim56Q80VI1 Gm23796-201ENSMUST00000084011 160 ntBASIC5.97□□□□□ -1.45
Trim56Q80VI1 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
Trim56Q80VI1 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.97□□□□□ -1.45
Trim56Q80VI1 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim56Q80VI1 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.97□□□□□ -1.45
Trim56Q80VI1 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim56Q80VI1 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.97□□□□□ -1.45
Trim56Q80VI1 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim56Q80VI1 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Trim56Q80VI1 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim56Q80VI1 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim56Q80VI1 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim56Q80VI1 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim56Q80VI1 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Trim56Q80VI1 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Trim56Q80VI1 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Trim56Q80VI1 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.45
Trim56Q80VI1 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Trim56Q80VI1 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Trim56Q80VI1 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Trim56Q80VI1 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.96□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 106.3 ms