Protein–RNA interactions for Protein: Q3UJV1

Ccdc61, Coiled-coil domain-containing protein 61, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc61Q3UJV1 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc61Q3UJV1 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc61Q3UJV1 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc61Q3UJV1 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc61Q3UJV1 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Ccdc61Q3UJV1 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Ccdc61Q3UJV1 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc61Q3UJV1 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc61Q3UJV1 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc61Q3UJV1 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc61Q3UJV1 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Ccdc61Q3UJV1 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm15526-201ENSMUST00000112504 204 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm14753-201ENSMUST00000118503 246 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm8430-201ENSMUST00000119780 471 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm12494-201ENSMUST00000121684 521 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm13531-201ENSMUST00000121893 543 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm4912-201ENSMUST00000122212 1044 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm22219-201ENSMUST00000157562 319 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm9022-202ENSMUST00000183285 483 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm27960-201ENSMUST00000183445 184 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm29397-201ENSMUST00000185205 333 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm29350-201ENSMUST00000189141 541 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm37701-201ENSMUST00000192947 1100 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm38150-201ENSMUST00000192996 452 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm44494-201ENSMUST00000196760 129 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm44016-201ENSMUST00000203463 164 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm19177-201ENSMUST00000204520 613 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm44817-201ENSMUST00000205416 453 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm6112-201ENSMUST00000208037 629 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm5830-201ENSMUST00000049117 443 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm18189-201ENSMUST00000218153 1951 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm15084-201ENSMUST00000178585 1502 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm43736-201ENSMUST00000196377 2281 ntBASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc61Q3UJV1 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Gm37767-201ENSMUST00000193239 1834 ntBASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Gm43389-201ENSMUST00000196080 2595 ntBASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Gm43896-201ENSMUST00000203440 2032 ntBASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Gm37831-201ENSMUST00000191685 1787 ntBASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Mir711-201ENSMUST00000102188 82 ntBASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Gm14652-201ENSMUST00000118479 235 ntBASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Gm7927-201ENSMUST00000118818 880 ntBASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC6.22□□□□□ -1.41
Ccdc61Q3UJV1 Gm6565-201ENSMUST00000121217 438 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms