Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Gm25846-201ENSMUST00000158013 135 ntBASIC1.84□□□□□ -2.11
Ush2AQ2QI47 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Gm20660-201ENSMUST00000177515 289 ntBASIC1.84□□□□□ -2.11
Ush2AQ2QI47 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC1.84□□□□□ -2.11
Ush2AQ2QI47 AC153361.1-201ENSMUST00000219679 247 ntBASIC1.84□□□□□ -2.11
Ush2AQ2QI47 CT030662.2-201ENSMUST00000226942 805 ntBASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Gm9845-201ENSMUST00000056409 598 ntBASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Gm4017-201ENSMUST00000084813 338 ntBASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Gm43282-201ENSMUST00000201848 2157 ntBASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Gm43025-201ENSMUST00000201764 1886 ntBASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Gm20276-201ENSMUST00000216122 2648 ntBASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Gm44542-201ENSMUST00000208677 4314 ntBASIC1.84□□□□□ -2.12
Ush2AQ2QI47 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Ush2AQ2QI47 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
Ush2AQ2QI47 Gm12005-201ENSMUST00000121451 379 ntBASIC1.84□□□□□ -2.12
Ush2AQ2QI47 Gm8121-201ENSMUST00000153583 499 ntBASIC1.84□□□□□ -2.12
Ush2AQ2QI47 Gm23980-201ENSMUST00000157135 158 ntBASIC1.84□□□□□ -2.12
Ush2AQ2QI47 AC154297.1-201ENSMUST00000171334 397 ntBASIC1.84□□□□□ -2.12
Ush2AQ2QI47 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Ush2AQ2QI47 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Ush2AQ2QI47 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Ush2AQ2QI47 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Ush2AQ2QI47 Gm18748-201ENSMUST00000198507 622 ntBASIC1.84□□□□□ -2.12
Ush2AQ2QI47 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
Ush2AQ2QI47 AC126554.4-201ENSMUST00000221055 409 ntBASIC1.84□□□□□ -2.12
Ush2AQ2QI47 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Ush2AQ2QI47 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.12
Ush2AQ2QI47 Gm23347-201ENSMUST00000083823 82 ntBASIC1.84□□□□□ -2.12
Ush2AQ2QI47 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC1.84□□□□□ -2.12
Ush2AQ2QI47 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Ush2AQ2QI47 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Ush2AQ2QI47 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
Ush2AQ2QI47 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
Ush2AQ2QI47 Gm42850-201ENSMUST00000202094 201 ntBASIC1.84□□□□□ -2.12
Ush2AQ2QI47 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Ush2AQ2QI47 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
Ush2AQ2QI47 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm23791-201ENSMUST00000122553 293 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm26028-201ENSMUST00000158660 294 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm3370-201ENSMUST00000171785 500 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm6947-201ENSMUST00000186254 78 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm5175-202ENSMUST00000219699 529 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm18363-201ENSMUST00000221671 730 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm43594-201ENSMUST00000201153 3442 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm26320-201ENSMUST00000157742 306 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm4207-201ENSMUST00000173144 960 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm8641-201ENSMUST00000186995 826 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm17893-201ENSMUST00000203017 770 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm34005-201ENSMUST00000215834 282 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 n-R5s40-201ENSMUST00000082475 124 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 AC131687.1-201ENSMUST00000225931 5446 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm37628-201ENSMUST00000194644 5440 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm6325-201ENSMUST00000122015 3114 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 AC124572.2-201ENSMUST00000218041 5152 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm5384-201ENSMUST00000120313 463 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm5396-201ENSMUST00000121222 532 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm13433-201ENSMUST00000121701 240 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm26494-201ENSMUST00000083154 143 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Gm24493-201ENSMUST00000083805 143 ntBASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ush2AQ2QI47 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms