Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Col6a1Q04857 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Col6a1Q04857 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.84□□□□□ -1.48
Col6a1Q04857 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.84□□□□□ -1.48
Col6a1Q04857 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Col6a1Q04857 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a1Q04857 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Col6a1Q04857 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a1Q04857 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Col6a1Q04857 Gm7646-201ENSMUST00000198590 1346 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 Gm37096-201ENSMUST00000192317 2058 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a1Q04857 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a1Q04857 Gm14163-201ENSMUST00000117342 217 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 Gm6062-201ENSMUST00000120462 631 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 Gm12095-201ENSMUST00000121962 816 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 Gm22216-201ENSMUST00000157557 114 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 Gm25865-201ENSMUST00000158247 104 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 Gm22675-201ENSMUST00000158430 104 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 Gm8214-201ENSMUST00000172123 351 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a1Q04857 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a1Q04857 Gm17916-202ENSMUST00000187634 1187 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC5.83□□□□□ -1.48
Col6a1Q04857 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.83□□□□□ -1.48
Col6a1Q04857 Gm44852-201ENSMUST00000207950 369 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC5.83□□□□□ -1.48
Col6a1Q04857 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 AC162387.1-201ENSMUST00000213369 213 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 Gm29818-201ENSMUST00000218070 165 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC5.83□□□□□ -1.48
Col6a1Q04857 Gm31931-201ENSMUST00000219666 222 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 AC102291.2-201ENSMUST00000228083 367 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.83□□□□□ -1.48
Col6a1Q04857 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col6a1Q04857 Mir346-201ENSMUST00000083547 98 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a1Q04857 AC134596.1-201ENSMUST00000222016 1922 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
Col6a1Q04857 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.83□□□□□ -1.48
Col6a1Q04857 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Col6a1Q04857 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
Col6a1Q04857 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a1Q04857 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a1Q04857 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a1Q04857 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col6a1Q04857 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col6a1Q04857 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm11270-201ENSMUST00000117685 471 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm12190-201ENSMUST00000120001 187 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm12237-201ENSMUST00000120158 470 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm14927-201ENSMUST00000120283 454 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm15387-201ENSMUST00000120421 648 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm13363-201ENSMUST00000122008 522 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a1Q04857 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a1Q04857 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm3362-201ENSMUST00000148102 466 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm25665-201ENSMUST00000157695 110 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm20673-201ENSMUST00000177167 430 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm5842-201ENSMUST00000195073 622 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm42539-201ENSMUST00000197009 308 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm43510-201ENSMUST00000197922 353 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm43142-201ENSMUST00000198670 361 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm5322-201ENSMUST00000206142 699 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC5.82□□□□□ -1.48
Col6a1Q04857 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm45530-201ENSMUST00000211658 225 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm45742-201ENSMUST00000212400 433 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm8158-201ENSMUST00000219220 465 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm8112-201ENSMUST00000219637 465 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm18696-201ENSMUST00000220103 274 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a1Q04857 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm5518-201ENSMUST00000084171 648 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Col6a1Q04857 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Col6a1Q04857 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Col6a1Q04857 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a1Q04857 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm18432-201ENSMUST00000195568 1451 ntBASIC5.82□□□□□ -1.48
Col6a1Q04857 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col6a1Q04857 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms