Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 AL669916.5-201ENSMUST00000214874 361 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Sox1P53783 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Sox1P53783 Gm23624-201ENSMUST00000082463 321 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Gm26439-201ENSMUST00000082592 106 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Snord42a-201ENSMUST00000082606 65 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Mir193a-201ENSMUST00000083461 66 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Gm6177-201ENSMUST00000085589 465 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Sox1P53783 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox1P53783 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sox1P53783 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sox1P53783 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox1P53783 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.61□□□□□ -1.51
Sox1P53783 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox1P53783 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox1P53783 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.6□□□□□ -1.51
Sox1P53783 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox1P53783 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Sox1P53783 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Sox1P53783 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Sox1P53783 Gm7195-201ENSMUST00000190869 1707 ntBASIC5.6□□□□□ -1.51
Sox1P53783 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.6□□□□□ -1.51
Sox1P53783 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Sox1P53783 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Sox1P53783 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox1P53783 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox1P53783 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.6□□□□□ -1.51
Sox1P53783 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Sox1P53783 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox1P53783 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Sox1P53783 Gm12924-201ENSMUST00000121747 318 ntBASIC5.6□□□□□ -1.51
Sox1P53783 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.6□□□□□ -1.51
Sox1P53783 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5.6□□□□□ -1.51
Sox1P53783 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Sox1P53783 Gm7925-201ENSMUST00000166690 401 ntBASIC5.6□□□□□ -1.51
Sox1P53783 Gm17121-201ENSMUST00000170414 847 ntBASIC5.6□□□□□ -1.51
Sox1P53783 Gm27896-201ENSMUST00000175162 317 ntBASIC5.6□□□□□ -1.51
Sox1P53783 Gm25671-201ENSMUST00000178612 105 ntBASIC5.6□□□□□ -1.51
Sox1P53783 Gm23307-201ENSMUST00000179167 105 ntBASIC5.6□□□□□ -1.51
Sox1P53783 Gm25286-201ENSMUST00000179790 105 ntBASIC5.6□□□□□ -1.51
Sox1P53783 Gm17222-201ENSMUST00000180135 847 ntBASIC5.6□□□□□ -1.51
Sox1P53783 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC5.6□□□□□ -1.51
Sox1P53783 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Sox1P53783 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC5.6□□□□□ -1.51
Sox1P53783 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC5.6□□□□□ -1.51
Sox1P53783 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.6□□□□□ -1.51
Sox1P53783 Gm37097-201ENSMUST00000193676 336 ntBASIC5.6□□□□□ -1.51
Sox1P53783 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.6□□□□□ -1.51
Sox1P53783 Gm42621-201ENSMUST00000198114 275 ntBASIC5.6□□□□□ -1.51
Sox1P53783 Gm43710-201ENSMUST00000199583 452 ntBASIC5.6□□□□□ -1.51
Sox1P53783 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.6□□□□□ -1.51
Sox1P53783 Gm19096-201ENSMUST00000209705 766 ntBASIC5.6□□□□□ -1.51
Sox1P53783 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC5.6□□□□□ -1.51
Sox1P53783 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.6□□□□□ -1.51
Sox1P53783 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.6□□□□□ -1.51
Sox1P53783 AL672194.1-201ENSMUST00000224841 603 ntBASIC5.6□□□□□ -1.51
Sox1P53783 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.6□□□□□ -1.51
Sox1P53783 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.6□□□□□ -1.51
Sox1P53783 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox1P53783 Gm22508-201ENSMUST00000082772 110 ntBASIC5.6□□□□□ -1.51
Sox1P53783 Gm24763-201ENSMUST00000083688 190 ntBASIC5.6□□□□□ -1.51
Sox1P53783 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox1P53783 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox1P53783 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Sox1P53783 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.6□□□□□ -1.51
Sox1P53783 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox1P53783 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC5.6□□□□□ -1.51
Sox1P53783 AC121844.2-201ENSMUST00000219067 2066 ntBASIC5.6□□□□□ -1.51
Sox1P53783 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Sox1P53783 Gm43229-201ENSMUST00000201812 1850 ntBASIC5.6□□□□□ -1.51
Sox1P53783 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.6□□□□□ -1.51
Sox1P53783 Gm42680-201ENSMUST00000196238 2500 ntBASIC5.59□□□□□ -1.51
Sox1P53783 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Sox1P53783 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Sox1P53783 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Sox1P53783 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
Sox1P53783 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Sox1P53783 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.59□□□□□ -1.51
Sox1P53783 Gm44679-201ENSMUST00000207202 2908 ntBASIC5.59□□□□□ -1.51
Sox1P53783 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Sox1P53783 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.59□□□□□ -1.51
Sox1P53783 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Sox1P53783 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Sox1P53783 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Sox1P53783 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.59□□□□□ -1.51
Sox1P53783 Gm12765-201ENSMUST00000117273 615 ntBASIC5.59□□□□□ -1.51
Sox1P53783 Gm13469-201ENSMUST00000118231 350 ntBASIC5.59□□□□□ -1.51
Sox1P53783 Gm7657-201ENSMUST00000118851 666 ntBASIC5.59□□□□□ -1.51
Sox1P53783 Gm14240-201ENSMUST00000120353 546 ntBASIC5.59□□□□□ -1.51
Sox1P53783 Gm11925-201ENSMUST00000121375 535 ntBASIC5.59□□□□□ -1.51
Sox1P53783 Gm12854-201ENSMUST00000128518 297 ntBASIC5.59□□□□□ -1.51
Sox1P53783 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.59□□□□□ -1.51
Sox1P53783 Gm24857-201ENSMUST00000158061 310 ntBASIC5.59□□□□□ -1.51
Sox1P53783 Gm22085-201ENSMUST00000158344 110 ntBASIC5.59□□□□□ -1.51
Sox1P53783 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.59□□□□□ -1.51
Sox1P53783 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC5.59□□□□□ -1.51
Sox1P53783 Gm27037-201ENSMUST00000182270 960 ntBASIC5.59□□□□□ -1.51
Sox1P53783 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.59□□□□□ -1.51
Sox1P53783 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms