Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm44598-201ENSMUST00000207566 150 ntBASIC5.89□□□□□ -1.47
Sox18P43680 Gm45777-201ENSMUST00000213009 301 ntBASIC5.89□□□□□ -1.47
Sox18P43680 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC5.89□□□□□ -1.47
Sox18P43680 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox18P43680 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.89□□□□□ -1.47
Sox18P43680 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC5.89□□□□□ -1.47
Sox18P43680 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.89□□□□□ -1.47
Sox18P43680 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC5.89□□□□□ -1.47
Sox18P43680 Gm10540-201ENSMUST00000097581 276 ntBASIC5.89□□□□□ -1.47
Sox18P43680 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.89□□□□□ -1.47
Sox18P43680 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Sox18P43680 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox18P43680 Gm7048-201ENSMUST00000199395 1891 ntBASIC5.89□□□□□ -1.47
Sox18P43680 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox18P43680 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Sox18P43680 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Sox18P43680 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.89□□□□□ -1.47
Sox18P43680 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Sox18P43680 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Sox18P43680 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Sox18P43680 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Sox18P43680 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Sox18P43680 Gm43395-201ENSMUST00000198717 2240 ntBASIC5.89□□□□□ -1.47
Sox18P43680 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox18P43680 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
Sox18P43680 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Sox18P43680 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox18P43680 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Sox18P43680 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox18P43680 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox18P43680 Gm44186-201ENSMUST00000204118 2752 ntBASIC5.88□□□□□ -1.47
Sox18P43680 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sox18P43680 Gm23705-201ENSMUST00000104370 130 ntBASIC5.88□□□□□ -1.47
Sox18P43680 Gm12285-201ENSMUST00000117347 233 ntBASIC5.88□□□□□ -1.47
Sox18P43680 Gm15112-201ENSMUST00000120152 860 ntBASIC5.88□□□□□ -1.47
Sox18P43680 Gm8545-201ENSMUST00000120692 801 ntBASIC5.88□□□□□ -1.47
Sox18P43680 Gm7670-201ENSMUST00000121272 641 ntBASIC5.88□□□□□ -1.47
Sox18P43680 Gm23463-201ENSMUST00000122468 99 ntBASIC5.88□□□□□ -1.47
Sox18P43680 Mir1907-201ENSMUST00000122509 90 ntBASIC5.88□□□□□ -1.47
Sox18P43680 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox18P43680 Gm5699-201ENSMUST00000152491 723 ntBASIC5.88□□□□□ -1.47
Sox18P43680 Gm24303-201ENSMUST00000178237 126 ntBASIC5.88□□□□□ -1.47
Sox18P43680 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Sox18P43680 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox18P43680 Gm27851-201ENSMUST00000183529 63 ntBASIC5.88□□□□□ -1.47
Sox18P43680 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
Sox18P43680 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox18P43680 Gm44382-201ENSMUST00000198683 122 ntBASIC5.88□□□□□ -1.47
Sox18P43680 Gm18007-201ENSMUST00000205019 844 ntBASIC5.88□□□□□ -1.47
Sox18P43680 Gm30694-201ENSMUST00000209278 1230 ntBASIC5.88□□□□□ -1.47
Sox18P43680 Gm35857-201ENSMUST00000212739 178 ntBASIC5.88□□□□□ -1.47
Sox18P43680 Gm45710-201ENSMUST00000212847 215 ntBASIC5.88□□□□□ -1.47
Sox18P43680 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.88□□□□□ -1.47
Sox18P43680 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.88□□□□□ -1.47
Sox18P43680 Gm7040-201ENSMUST00000223271 443 ntBASIC5.88□□□□□ -1.47
Sox18P43680 CT009510.2-203ENSMUST00000226704 2136 ntBASIC5.88□□□□□ -1.47
Sox18P43680 AC129541.1-201ENSMUST00000226940 523 ntBASIC5.88□□□□□ -1.47
Sox18P43680 AC165138.1-201ENSMUST00000226984 270 ntBASIC5.88□□□□□ -1.47
Sox18P43680 AC122251.2-201ENSMUST00000227341 603 ntBASIC5.88□□□□□ -1.47
Sox18P43680 Gm28392-201ENSMUST00000077630 393 ntBASIC5.88□□□□□ -1.47
Sox18P43680 Gm24405-201ENSMUST00000083033 167 ntBASIC5.88□□□□□ -1.47
Sox18P43680 Mir342-201ENSMUST00000083502 99 ntBASIC5.88□□□□□ -1.47
Sox18P43680 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox18P43680 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sox18P43680 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox18P43680 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.88□□□□□ -1.47
Sox18P43680 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox18P43680 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
Sox18P43680 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox18P43680 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox18P43680 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sox18P43680 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox18P43680 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox18P43680 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.88□□□□□ -1.47
Sox18P43680 Gm43707-201ENSMUST00000196451 3187 ntBASIC5.88□□□□□ -1.47
Sox18P43680 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Sox18P43680 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC5.87□□□□□ -1.47
Sox18P43680 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.87□□□□□ -1.47
Sox18P43680 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.87□□□□□ -1.47
Sox18P43680 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox18P43680 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.87□□□□□ -1.47
Sox18P43680 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox18P43680 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox18P43680 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox18P43680 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox18P43680 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox18P43680 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox18P43680 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox18P43680 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sox18P43680 AC122263.1-201ENSMUST00000228636 2805 ntBASIC5.87□□□□□ -1.47
Sox18P43680 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sox18P43680 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sox18P43680 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Sox18P43680 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Sox18P43680 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox18P43680 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Sox18P43680 Gm11737-201ENSMUST00000118713 468 ntBASIC5.87□□□□□ -1.47
Sox18P43680 Gm13396-201ENSMUST00000120617 271 ntBASIC5.87□□□□□ -1.47
Sox18P43680 Gm15223-201ENSMUST00000120989 826 ntBASIC5.87□□□□□ -1.47
Sox18P43680 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms