Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Usp4P35123 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Usp4P35123 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Usp4P35123 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Usp4P35123 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Usp4P35123 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Usp4P35123 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Usp4P35123 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Usp4P35123 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.24□□□□□ -1.57
Usp4P35123 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.24□□□□□ -1.57
Usp4P35123 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Usp4P35123 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usp4P35123 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usp4P35123 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Usp4P35123 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Usp4P35123 AC162910.1-201ENSMUST00000221219 1723 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usp4P35123 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Usp4P35123 Mir193b-201ENSMUST00000103784 79 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
Usp4P35123 Gm11550-201ENSMUST00000118210 699 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Gm14771-201ENSMUST00000118249 203 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Gm13785-201ENSMUST00000119099 690 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Gm16428-201ENSMUST00000121193 723 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Gm22958-201ENSMUST00000122512 184 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Usp4P35123 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.24□□□□□ -1.57
Usp4P35123 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.24□□□□□ -1.57
Usp4P35123 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Usp4P35123 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Usp4P35123 Gm17086-201ENSMUST00000171346 484 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Gm5527-201ENSMUST00000179821 642 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Gm27543-201ENSMUST00000183562 177 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Gm27599-201ENSMUST00000183758 174 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usp4P35123 Gm29105-201ENSMUST00000187256 450 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Gm28700-201ENSMUST00000187614 579 ntBASIC5.24□□□□□ -1.57
Usp4P35123 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Usp4P35123 Gm22897-201ENSMUST00000197860 128 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Gm19649-201ENSMUST00000201126 822 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Gm3148-201ENSMUST00000203594 612 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC5.24□□□□□ -1.57
Usp4P35123 Gm45530-201ENSMUST00000211658 225 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Usp4P35123 Gm7034-201ENSMUST00000218638 645 ntBASIC5.24□□□□□ -1.57
Usp4P35123 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC5.24□□□□□ -1.57
Usp4P35123 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.24□□□□□ -1.57
Usp4P35123 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Usp4P35123 Gm20368-201ENSMUST00000220716 301 ntBASIC5.24□□□□□ -1.57
Usp4P35123 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Ap3m1-208ENSMUST00000224016 764 ntBASIC5.24□□□□□ -1.57
Usp4P35123 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usp4P35123 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Usp4P35123 Gm22364-201ENSMUST00000083097 98 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usp4P35123 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.24□□□□□ -1.57
Usp4P35123 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usp4P35123 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usp4P35123 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usp4P35123 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Usp4P35123 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Usp4P35123 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.24□□□□□ -1.57
Usp4P35123 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.24□□□□□ -1.57
Usp4P35123 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.24□□□□□ -1.57
Usp4P35123 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Usp4P35123 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Usp4P35123 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Usp4P35123 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.23□□□□□ -1.57
Usp4P35123 Gm44708-201ENSMUST00000205580 2237 ntBASIC5.23□□□□□ -1.57
Usp4P35123 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Usp4P35123 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Usp4P35123 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Usp4P35123 Gm24350-201ENSMUST00000104163 133 ntBASIC5.23□□□□□ -1.57
Usp4P35123 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.23□□□□□ -1.57
Usp4P35123 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.23□□□□□ -1.57
Usp4P35123 Gm13379-201ENSMUST00000118053 621 ntBASIC5.23□□□□□ -1.57
Usp4P35123 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.23□□□□□ -1.57
Usp4P35123 Gm13755-201ENSMUST00000118509 305 ntBASIC5.23□□□□□ -1.57
Usp4P35123 Gm7429-201ENSMUST00000118664 348 ntBASIC5.23□□□□□ -1.57
Usp4P35123 Gm14128-201ENSMUST00000119514 1011 ntBASIC5.23□□□□□ -1.57
Usp4P35123 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.23□□□□□ -1.57
Usp4P35123 Gm15387-201ENSMUST00000120421 648 ntBASIC5.23□□□□□ -1.57
Usp4P35123 Gm14574-201ENSMUST00000120644 279 ntBASIC5.23□□□□□ -1.57
Usp4P35123 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC5.23□□□□□ -1.57
Usp4P35123 Gm25293-201ENSMUST00000122792 285 ntBASIC5.23□□□□□ -1.57
Usp4P35123 Gm22312-201ENSMUST00000158005 130 ntBASIC5.23□□□□□ -1.57
Usp4P35123 Gm23028-201ENSMUST00000158773 265 ntBASIC5.23□□□□□ -1.57
Usp4P35123 Gm16566-201ENSMUST00000160387 910 ntBASIC5.23□□□□□ -1.57
Usp4P35123 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC5.23□□□□□ -1.57
Usp4P35123 Gm5709-201ENSMUST00000177879 1165 ntBASIC5.23□□□□□ -1.57
Usp4P35123 Gm8221-201ENSMUST00000178052 564 ntBASIC5.23□□□□□ -1.57
Usp4P35123 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.23□□□□□ -1.57
Usp4P35123 Gm37164-201ENSMUST00000192809 637 ntBASIC5.23□□□□□ -1.57
Usp4P35123 Gm5842-201ENSMUST00000195073 622 ntBASIC5.23□□□□□ -1.57
Usp4P35123 Gm37882-201ENSMUST00000195254 196 ntBASIC5.23□□□□□ -1.57
Usp4P35123 Gm2053-201ENSMUST00000195671 631 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms