Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm18944-201ENSMUST00000207672 643 ntBASIC3.21□□□□□ -1.9
Sdc1P18828 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.21□□□□□ -1.9
Sdc1P18828 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC3.21□□□□□ -1.9
Sdc1P18828 AC151843.1-201ENSMUST00000215960 691 ntBASIC3.21□□□□□ -1.9
Sdc1P18828 Gm18507-201ENSMUST00000218855 525 ntBASIC3.21□□□□□ -1.9
Sdc1P18828 Gm18409-202ENSMUST00000220105 529 ntBASIC3.21□□□□□ -1.9
Sdc1P18828 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.21□□□□□ -1.9
Sdc1P18828 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.21□□□□□ -1.9
Sdc1P18828 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.21□□□□□ -1.9
Sdc1P18828 Clec2j-201ENSMUST00000032517 515 ntBASIC3.21□□□□□ -1.9
Sdc1P18828 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Sdc1P18828 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Sdc1P18828 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
Sdc1P18828 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Sdc1P18828 BC051076-202ENSMUST00000199477 2868 ntBASIC3.21□□□□□ -1.9
Sdc1P18828 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Sdc1P18828 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Sdc1P18828 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.21□□□□□ -1.9
Sdc1P18828 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Sdc1P18828 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Sdc1P18828 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Sdc1P18828 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Sdc1P18828 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Sdc1P18828 Gm23256-201ENSMUST00000102235 110 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm26140-201ENSMUST00000103807 110 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm15108-201ENSMUST00000116160 803 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm13890-201ENSMUST00000117578 390 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm14795-201ENSMUST00000118461 471 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm14521-201ENSMUST00000119545 350 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm12691-201ENSMUST00000120186 456 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm11804-201ENSMUST00000121663 468 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm7840-201ENSMUST00000122086 533 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm15111-201ENSMUST00000122142 878 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC3.2□□□□□ -1.9
Sdc1P18828 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Sdc1P18828 Gm22908-201ENSMUST00000177620 110 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm22111-201ENSMUST00000178010 79 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm23687-201ENSMUST00000178664 79 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm25944-201ENSMUST00000178758 94 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Sdc1P18828 Gm24566-201ENSMUST00000179286 79 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm23305-201ENSMUST00000179342 79 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm25019-201ENSMUST00000179732 110 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm26389-201ENSMUST00000179819 79 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm22130-201ENSMUST00000179979 79 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm22393-201ENSMUST00000180153 79 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm25085-201ENSMUST00000180298 79 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Sdc1P18828 Gm8604-201ENSMUST00000183150 965 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm8669-201ENSMUST00000183839 945 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC3.2□□□□□ -1.9
Sdc1P18828 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC3.2□□□□□ -1.9
Sdc1P18828 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.2□□□□□ -1.9
Sdc1P18828 Gm29332-201ENSMUST00000190829 227 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Sdc1P18828 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm37098-201ENSMUST00000192290 244 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Igkv4-56-201ENSMUST00000198436 349 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Sdc1P18828 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.2□□□□□ -1.9
Sdc1P18828 Gm18452-201ENSMUST00000202968 1111 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm2926-201ENSMUST00000205625 239 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm8423-201ENSMUST00000211387 607 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.2□□□□□ -1.9
Sdc1P18828 Gm18039-201ENSMUST00000217816 728 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC3.2□□□□□ -1.9
Sdc1P18828 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm5175-202ENSMUST00000219699 529 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Gm18704-201ENSMUST00000219736 446 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Sdc1P18828 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC3.2□□□□□ -1.9
Sdc1P18828 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 AC154583.1-201ENSMUST00000224788 655 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 AC192088.2-201ENSMUST00000227590 411 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 AC192088.3-201ENSMUST00000227858 831 ntBASIC3.2□□□□□ -1.9
Sdc1P18828 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Sdc1P18828 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Sdc1P18828 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Sdc1P18828 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Sdc1P18828 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Sdc1P18828 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Sdc1P18828 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Sdc1P18828 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Sdc1P18828 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Sdc1P18828 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Sdc1P18828 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC3.2□□□□□ -1.9
Sdc1P18828 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Sdc1P18828 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC3.19□□□□□ -1.9
Sdc1P18828 Gm42967-201ENSMUST00000198647 2312 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Sdc1P18828 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Mir592-201ENSMUST00000102113 96 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Gm24273-201ENSMUST00000102332 164 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Gm24788-201ENSMUST00000104283 156 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.19□□□□□ -1.9
Sdc1P18828 Gm11346-201ENSMUST00000118346 704 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms