Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Msx1P13297 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Msx1P13297 AC125328.1-201ENSMUST00000226812 2265 ntBASIC5.86□□□□□ -1.47
Msx1P13297 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Msx1P13297 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Msx1P13297 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.86□□□□□ -1.47
Msx1P13297 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.86□□□□□ -1.47
Msx1P13297 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Msx1P13297 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Msx1P13297 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
Msx1P13297 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Msx1P13297 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Msx1P13297 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC5.86□□□□□ -1.47
Msx1P13297 Mir700-201ENSMUST00000102169 79 ntBASIC5.86□□□□□ -1.47
Msx1P13297 Gm22372-201ENSMUST00000104589 136 ntBASIC5.86□□□□□ -1.47
Msx1P13297 Gm13400-201ENSMUST00000117436 380 ntBASIC5.86□□□□□ -1.47
Msx1P13297 Gm12647-201ENSMUST00000118977 265 ntBASIC5.86□□□□□ -1.47
Msx1P13297 Gm15377-201ENSMUST00000119594 246 ntBASIC5.86□□□□□ -1.47
Msx1P13297 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC5.86□□□□□ -1.47
Msx1P13297 Gm24191-201ENSMUST00000157977 122 ntBASIC5.86□□□□□ -1.47
Msx1P13297 Gm22389-201ENSMUST00000158193 301 ntBASIC5.86□□□□□ -1.47
Msx1P13297 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.86□□□□□ -1.47
Msx1P13297 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC5.86□□□□□ -1.47
Msx1P13297 Gm25065-201ENSMUST00000177914 132 ntBASIC5.86□□□□□ -1.47
Msx1P13297 Gm25891-201ENSMUST00000180050 132 ntBASIC5.86□□□□□ -1.47
Msx1P13297 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.86□□□□□ -1.47
Msx1P13297 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC5.86□□□□□ -1.47
Msx1P13297 Ighv1-6-201ENSMUST00000193849 293 ntBASIC5.86□□□□□ -1.47
Msx1P13297 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Msx1P13297 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.86□□□□□ -1.47
Msx1P13297 Gm7652-201ENSMUST00000200440 1151 ntBASIC5.86□□□□□ -1.47
Msx1P13297 Gm45710-201ENSMUST00000212847 215 ntBASIC5.86□□□□□ -1.47
Msx1P13297 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC5.86□□□□□ -1.47
Msx1P13297 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.86□□□□□ -1.47
Msx1P13297 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Msx1P13297 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.86□□□□□ -1.47
Msx1P13297 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.86□□□□□ -1.47
Msx1P13297 Gm5670-201ENSMUST00000093546 372 ntBASIC5.86□□□□□ -1.47
Msx1P13297 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Msx1P13297 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Msx1P13297 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Msx1P13297 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Msx1P13297 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Msx1P13297 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Msx1P13297 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Msx1P13297 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Msx1P13297 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Msx1P13297 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Msx1P13297 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Msx1P13297 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Msx1P13297 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.86□□□□□ -1.47
Msx1P13297 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Msx1P13297 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Msx1P13297 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Msx1P13297 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
Msx1P13297 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Msx1P13297 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Msx1P13297 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Msx1P13297 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Msx1P13297 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Msx1P13297 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Msx1P13297 Gm14245-201ENSMUST00000118939 1843 ntBASIC5.85□□□□□ -1.47
Msx1P13297 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.85□□□□□ -1.47
Msx1P13297 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msx1P13297 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Msx1P13297 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Msx1P13297 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.85□□□□□ -1.47
Msx1P13297 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msx1P13297 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Msx1P13297 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.85□□□□□ -1.47
Msx1P13297 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Msx1P13297 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.85□□□□□ -1.47
Msx1P13297 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC5.85□□□□□ -1.47
Msx1P13297 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msx1P13297 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msx1P13297 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msx1P13297 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Msx1P13297 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
Msx1P13297 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Msx1P13297 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Msx1P13297 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Msx1P13297 Gm24605-201ENSMUST00000104772 96 ntBASIC5.85□□□□□ -1.47
Msx1P13297 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msx1P13297 Gm8430-201ENSMUST00000119780 471 ntBASIC5.85□□□□□ -1.47
Msx1P13297 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC5.85□□□□□ -1.47
Msx1P13297 Gm11369-201ENSMUST00000120812 318 ntBASIC5.85□□□□□ -1.47
Msx1P13297 Gm12486-201ENSMUST00000120887 541 ntBASIC5.85□□□□□ -1.47
Msx1P13297 Gm22598-201ENSMUST00000157600 127 ntBASIC5.85□□□□□ -1.47
Msx1P13297 Gm23224-201ENSMUST00000158122 271 ntBASIC5.85□□□□□ -1.47
Msx1P13297 Gm23759-201ENSMUST00000158351 268 ntBASIC5.85□□□□□ -1.47
Msx1P13297 Gm17065-201ENSMUST00000165245 239 ntBASIC5.85□□□□□ -1.47
Msx1P13297 Gm18953-201ENSMUST00000175694 300 ntBASIC5.85□□□□□ -1.47
Msx1P13297 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Msx1P13297 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Msx1P13297 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC5.85□□□□□ -1.47
Msx1P13297 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msx1P13297 Gm37609-201ENSMUST00000191778 678 ntBASIC5.85□□□□□ -1.47
Msx1P13297 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.85□□□□□ -1.47
Msx1P13297 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Msx1P13297 Gm44977-201ENSMUST00000205283 420 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms