Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.08□□□□□ -1.76
Col1a1P11087 Gm44164-201ENSMUST00000203605 2561 ntBASIC4.08□□□□□ -1.76
Col1a1P11087 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col1a1P11087 Gm14586-201ENSMUST00000119571 408 ntBASIC4.08□□□□□ -1.76
Col1a1P11087 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Col1a1P11087 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC4.08□□□□□ -1.76
Col1a1P11087 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Col1a1P11087 Gm43276-201ENSMUST00000199712 364 ntBASIC4.08□□□□□ -1.76
Col1a1P11087 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC4.08□□□□□ -1.76
Col1a1P11087 AC118006.2-201ENSMUST00000224167 962 ntBASIC4.08□□□□□ -1.76
Col1a1P11087 Gm26129-201ENSMUST00000082719 107 ntBASIC4.08□□□□□ -1.76
Col1a1P11087 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC4.08□□□□□ -1.76
Col1a1P11087 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Col1a1P11087 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col1a1P11087 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.08□□□□□ -1.76
Col1a1P11087 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col1a1P11087 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col1a1P11087 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col1a1P11087 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Col1a1P11087 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col1a1P11087 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col1a1P11087 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC4.07□□□□□ -1.76
Col1a1P11087 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
Col1a1P11087 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC4.07□□□□□ -1.76
Col1a1P11087 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col1a1P11087 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col1a1P11087 Gm37966-201ENSMUST00000193122 326 ntBASIC4.07□□□□□ -1.76
Col1a1P11087 Gm6510-201ENSMUST00000195916 574 ntBASIC4.07□□□□□ -1.76
Col1a1P11087 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.07□□□□□ -1.76
Col1a1P11087 Olfr895-201ENSMUST00000093864 951 ntBASIC4.07□□□□□ -1.76
Col1a1P11087 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col1a1P11087 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col1a1P11087 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col1a1P11087 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col1a1P11087 Gm5362-201ENSMUST00000211968 3085 ntBASIC4.06□□□□□ -1.76
Col1a1P11087 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col1a1P11087 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Col1a1P11087 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col1a1P11087 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
Col1a1P11087 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col1a1P11087 Gm11576-201ENSMUST00000117433 417 ntBASIC4.06□□□□□ -1.76
Col1a1P11087 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC4.06□□□□□ -1.76
Col1a1P11087 Gm15142-201ENSMUST00000121013 856 ntBASIC4.06□□□□□ -1.76
Col1a1P11087 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col1a1P11087 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col1a1P11087 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col1a1P11087 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC4.06□□□□□ -1.76
Col1a1P11087 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col1a1P11087 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col1a1P11087 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col1a1P11087 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC4.06□□□□□ -1.76
Col1a1P11087 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col1a1P11087 Mir6413-201ENSMUST00000184049 108 ntBASIC4.06□□□□□ -1.76
Col1a1P11087 Mir6916-201ENSMUST00000184514 63 ntBASIC4.06□□□□□ -1.76
Col1a1P11087 Gm39147-201ENSMUST00000211376 465 ntBASIC4.06□□□□□ -1.76
Col1a1P11087 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC4.06□□□□□ -1.76
Col1a1P11087 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col1a1P11087 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col1a1P11087 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col1a1P11087 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col1a1P11087 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC4.06□□□□□ -1.76
Col1a1P11087 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col1a1P11087 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col1a1P11087 Gm11673-201ENSMUST00000117846 331 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 Gm13557-201ENSMUST00000120771 382 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 Gm12578-201ENSMUST00000121244 417 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 Gm24380-201ENSMUST00000122696 324 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 Gm2892-201ENSMUST00000145537 711 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 Gm23231-201ENSMUST00000157299 104 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 Ear-ps10-201ENSMUST00000161871 460 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC4.05□□□□□ -1.76
Col1a1P11087 Gm45006-201ENSMUST00000206078 690 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 Gm18225-201ENSMUST00000216708 742 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 AC159297.1-201ENSMUST00000218689 290 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 Gm16419-201ENSMUST00000221057 625 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 AC102815.1-201ENSMUST00000226662 1061 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col1a1P11087 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col1a1P11087 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Col1a1P11087 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Col1a1P11087 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Col1a1P11087 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col1a1P11087 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col1a1P11087 Gm42479-201ENSMUST00000198654 1356 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.05□□□□□ -1.76
Col1a1P11087 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col1a1P11087 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Col1a1P11087 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col1a1P11087 Gm11896-201ENSMUST00000121105 820 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 Gm12819-201ENSMUST00000122223 629 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 Gm23668-201ENSMUST00000157465 111 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 Gm22214-201ENSMUST00000157563 172 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 Gm18900-201ENSMUST00000193218 584 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 Gm44320-201ENSMUST00000199276 86 ntBASIC4.05□□□□□ -1.76
Col1a1P11087 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Col1a1P11087 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms