Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm6680-201ENSMUST00000192789 950 ntBASIC4.61□□□□□ -1.67
Col3a1P08121 Gm6321-201ENSMUST00000194460 1090 ntBASIC4.61□□□□□ -1.67
Col3a1P08121 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col3a1P08121 Gm44475-201ENSMUST00000204041 424 ntBASIC4.61□□□□□ -1.67
Col3a1P08121 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.61□□□□□ -1.67
Col3a1P08121 Gm18268-201ENSMUST00000208445 943 ntBASIC4.61□□□□□ -1.67
Col3a1P08121 Gm45420-201ENSMUST00000211243 425 ntBASIC4.61□□□□□ -1.67
Col3a1P08121 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC4.61□□□□□ -1.67
Col3a1P08121 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col3a1P08121 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Col3a1P08121 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.61□□□□□ -1.67
Col3a1P08121 Gm23102-201ENSMUST00000083724 116 ntBASIC4.61□□□□□ -1.67
Col3a1P08121 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Col3a1P08121 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col3a1P08121 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Col3a1P08121 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col3a1P08121 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col3a1P08121 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Col3a1P08121 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.6□□□□□ -1.67
Col3a1P08121 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Col3a1P08121 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Col3a1P08121 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col3a1P08121 Gm45263-201ENSMUST00000210377 1375 ntBASIC4.6□□□□□ -1.67
Col3a1P08121 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col3a1P08121 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Col3a1P08121 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Col3a1P08121 Gm22115-201ENSMUST00000103976 133 ntBASIC4.6□□□□□ -1.67
Col3a1P08121 Gm23923-201ENSMUST00000104108 133 ntBASIC4.6□□□□□ -1.67
Col3a1P08121 Gm24340-201ENSMUST00000104208 97 ntBASIC4.6□□□□□ -1.67
Col3a1P08121 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Col3a1P08121 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col3a1P08121 Gm11971-201ENSMUST00000117715 288 ntBASIC4.6□□□□□ -1.67
Col3a1P08121 Gm8858-201ENSMUST00000118259 342 ntBASIC4.6□□□□□ -1.67
Col3a1P08121 Gm12387-201ENSMUST00000118573 955 ntBASIC4.6□□□□□ -1.67
Col3a1P08121 Gm5754-201ENSMUST00000118774 892 ntBASIC4.6□□□□□ -1.67
Col3a1P08121 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.6□□□□□ -1.67
Col3a1P08121 Mir6993-201ENSMUST00000184912 65 ntBASIC4.6□□□□□ -1.67
Col3a1P08121 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.6□□□□□ -1.67
Col3a1P08121 Gm38234-201ENSMUST00000195204 421 ntBASIC4.6□□□□□ -1.67
Col3a1P08121 Gm5309-201ENSMUST00000197416 677 ntBASIC4.6□□□□□ -1.67
Col3a1P08121 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC4.6□□□□□ -1.67
Col3a1P08121 Gm44513-201ENSMUST00000206811 439 ntBASIC4.6□□□□□ -1.67
Col3a1P08121 Gm18645-202ENSMUST00000212222 760 ntBASIC4.6□□□□□ -1.67
Col3a1P08121 AC159819.1-201ENSMUST00000213911 328 ntBASIC4.6□□□□□ -1.67
Col3a1P08121 AC166830.1-201ENSMUST00000224201 533 ntBASIC4.6□□□□□ -1.67
Col3a1P08121 Gm25799-201ENSMUST00000082643 107 ntBASIC4.6□□□□□ -1.67
Col3a1P08121 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
Col3a1P08121 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC4.59□□□□□ -1.67
Col3a1P08121 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col3a1P08121 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Col3a1P08121 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col3a1P08121 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col3a1P08121 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Col3a1P08121 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col3a1P08121 Gm22590-201ENSMUST00000104247 128 ntBASIC4.59□□□□□ -1.67
Col3a1P08121 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC4.59□□□□□ -1.67
Col3a1P08121 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.59□□□□□ -1.67
Col3a1P08121 Gm12465-201ENSMUST00000118591 300 ntBASIC4.59□□□□□ -1.67
Col3a1P08121 Gm15026-201ENSMUST00000119219 458 ntBASIC4.59□□□□□ -1.67
Col3a1P08121 Gm6806-201ENSMUST00000120092 1006 ntBASIC4.59□□□□□ -1.67
Col3a1P08121 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Col3a1P08121 Gm24532-201ENSMUST00000157951 286 ntBASIC4.59□□□□□ -1.67
Col3a1P08121 Gm22840-201ENSMUST00000158444 136 ntBASIC4.59□□□□□ -1.67
Col3a1P08121 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Col3a1P08121 Gm17655-201ENSMUST00000167969 255 ntBASIC4.59□□□□□ -1.67
Col3a1P08121 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col3a1P08121 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Col3a1P08121 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC4.59□□□□□ -1.67
Col3a1P08121 Gm37617-201ENSMUST00000194309 159 ntBASIC4.59□□□□□ -1.67
Col3a1P08121 Gm42857-201ENSMUST00000200823 339 ntBASIC4.59□□□□□ -1.67
Col3a1P08121 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Col3a1P08121 Gm19233-201ENSMUST00000219772 936 ntBASIC4.59□□□□□ -1.67
Col3a1P08121 AC164297.5-201ENSMUST00000224365 198 ntBASIC4.59□□□□□ -1.67
Col3a1P08121 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Col3a1P08121 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
Col3a1P08121 Olfr1160-201ENSMUST00000099839 960 ntBASIC4.59□□□□□ -1.67
Col3a1P08121 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.59□□□□□ -1.67
Col3a1P08121 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Col3a1P08121 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Col3a1P08121 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col3a1P08121 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
Col3a1P08121 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Col3a1P08121 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.58□□□□□ -1.68
Col3a1P08121 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col3a1P08121 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Col3a1P08121 Gm12401-201ENSMUST00000118435 228 ntBASIC4.58□□□□□ -1.68
Col3a1P08121 Gm11483-201ENSMUST00000119839 247 ntBASIC4.58□□□□□ -1.68
Col3a1P08121 Gm23207-201ENSMUST00000158665 102 ntBASIC4.58□□□□□ -1.68
Col3a1P08121 Gm23819-201ENSMUST00000158744 109 ntBASIC4.58□□□□□ -1.68
Col3a1P08121 Gm21638-201ENSMUST00000179473 836 ntBASIC4.58□□□□□ -1.68
Col3a1P08121 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC4.58□□□□□ -1.68
Col3a1P08121 Mir7578-201ENSMUST00000183455 82 ntBASIC4.58□□□□□ -1.68
Col3a1P08121 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col3a1P08121 Gm18529-201ENSMUST00000193025 1257 ntBASIC4.58□□□□□ -1.68
Col3a1P08121 Gm19196-201ENSMUST00000209258 357 ntBASIC4.58□□□□□ -1.68
Col3a1P08121 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col3a1P08121 AC168880.1-201ENSMUST00000225113 707 ntBASIC4.58□□□□□ -1.68
Col3a1P08121 AC154747.1-201ENSMUST00000225265 239 ntBASIC4.58□□□□□ -1.68
Col3a1P08121 AC167192.1-201ENSMUST00000225908 139 ntBASIC4.58□□□□□ -1.68
Col3a1P08121 AC154562.1-201ENSMUST00000226140 966 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms