Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gm12978-201ENSMUST00000121250 522 ntBASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gm13406-201ENSMUST00000121991 256 ntBASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gm43015-201ENSMUST00000199087 565 ntBASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gm44439-201ENSMUST00000203379 3592 ntBASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gm5263-201ENSMUST00000163646 601 ntBASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gm20574-201ENSMUST00000182867 917 ntBASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gm27893-201ENSMUST00000184408 194 ntBASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gm8641-201ENSMUST00000186995 826 ntBASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gm6261-201ENSMUST00000204707 760 ntBASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gm4017-201ENSMUST00000084813 338 ntBASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gm37140-201ENSMUST00000192914 1684 ntBASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gm38235-201ENSMUST00000194600 4952 ntBASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gm12261-201ENSMUST00000117499 645 ntBASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gm15057-201ENSMUST00000121516 534 ntBASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gm22141-201ENSMUST00000157403 277 ntBASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gm4207-201ENSMUST00000173144 960 ntBASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gm45013-201ENSMUST00000206883 178 ntBASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Gm24698-201ENSMUST00000083883 130 ntBASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 AC165106.3-201ENSMUST00000228191 3843 ntBASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Gm37628-201ENSMUST00000194644 5440 ntBASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Ighv8-1-201ENSMUST00000194897 291 ntBASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Gm42694-201ENSMUST00000196951 358 ntBASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Gm44765-201ENSMUST00000206927 601 ntBASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 AC122188.1-201ENSMUST00000217534 312 ntBASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Gm16383-201ENSMUST00000118122 232 ntBASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Gm25290-201ENSMUST00000122796 144 ntBASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Gm22500-201ENSMUST00000158982 99 ntBASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Gm9892-201ENSMUST00000182415 992 ntBASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Gm3972-201ENSMUST00000173960 2861 ntBASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Col6a3E9PWQ3 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Mir6386-201ENSMUST00000183558 104 ntBASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Gm43586-201ENSMUST00000195948 310 ntBASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Gm13311-201ENSMUST00000117863 379 ntBASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Gm12787-201ENSMUST00000119234 396 ntBASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Gm4914-201ENSMUST00000119757 459 ntBASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Gm22187-201ENSMUST00000157819 129 ntBASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Gm11881-201ENSMUST00000119408 572 ntBASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Gm25447-201ENSMUST00000158997 128 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms