Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm24041-201ENSMUST00000083115 156 ntBASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm26128-201ENSMUST00000083170 110 ntBASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm37195-201ENSMUST00000192006 3018 ntBASIC5.45□□□□□ -1.54
Trim39Q9ESN2 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm25795-201ENSMUST00000104421 132 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Snord72-201ENSMUST00000104549 81 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm5757-201ENSMUST00000117494 528 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm16089-201ENSMUST00000117679 336 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm13811-201ENSMUST00000117800 256 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm11227-201ENSMUST00000119774 471 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm24240-201ENSMUST00000157785 135 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm24186-201ENSMUST00000157983 127 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm23864-201ENSMUST00000177607 107 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm28654-201ENSMUST00000189801 379 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm43779-201ENSMUST00000196691 829 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm43467-201ENSMUST00000197441 437 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Igkv4-73-201ENSMUST00000199760 358 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm43415-201ENSMUST00000201934 750 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm44074-201ENSMUST00000204562 337 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm44779-201ENSMUST00000206937 708 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm44820-201ENSMUST00000207420 396 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm45365-201ENSMUST00000209489 256 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm45730-201ENSMUST00000212560 395 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm19326-201ENSMUST00000219818 326 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm9237-201ENSMUST00000221499 548 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm46369-201ENSMUST00000221577 401 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm9292-201ENSMUST00000222008 710 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Gm2645-201ENSMUST00000223516 547 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 AC158982.2-201ENSMUST00000226283 184 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 AC155167.1-201ENSMUST00000228931 614 ntBASIC5.44□□□□□ -1.54
Trim39Q9ESN2 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trim39Q9ESN2 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim39Q9ESN2 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim39Q9ESN2 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Trim39Q9ESN2 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim39Q9ESN2 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim39Q9ESN2 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim39Q9ESN2 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Trim39Q9ESN2 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Trim39Q9ESN2 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Trim39Q9ESN2 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim39Q9ESN2 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC5.43□□□□□ -1.54
Trim39Q9ESN2 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim39Q9ESN2 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim39Q9ESN2 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC5.43□□□□□ -1.54
Trim39Q9ESN2 Gm12308-201ENSMUST00000120440 389 ntBASIC5.43□□□□□ -1.54
Trim39Q9ESN2 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.43□□□□□ -1.54
Trim39Q9ESN2 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC5.43□□□□□ -1.54
Trim39Q9ESN2 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim39Q9ESN2 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms