Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC3.11□□□□□ -1.91
Col6a6Q8C6K9 Gm44399-201ENSMUST00000205043 226 ntBASIC3.11□□□□□ -1.91
Col6a6Q8C6K9 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Col6a6Q8C6K9 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC3.11□□□□□ -1.91
Col6a6Q8C6K9 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Col6a6Q8C6K9 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC3.11□□□□□ -1.91
Col6a6Q8C6K9 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col6a6Q8C6K9 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.11□□□□□ -1.91
Col6a6Q8C6K9 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Col6a6Q8C6K9 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Col6a6Q8C6K9 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col6a6Q8C6K9 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col6a6Q8C6K9 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col6a6Q8C6K9 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.11□□□□□ -1.91
Col6a6Q8C6K9 Gm11970-201ENSMUST00000116105 320 ntBASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm12156-201ENSMUST00000119188 554 ntBASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm23753-201ENSMUST00000157575 149 ntBASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm24019-201ENSMUST00000178620 107 ntBASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm26243-201ENSMUST00000179260 107 ntBASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm29062-201ENSMUST00000186032 694 ntBASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm29259-201ENSMUST00000186396 694 ntBASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm28255-201ENSMUST00000187101 694 ntBASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm29545-201ENSMUST00000188878 694 ntBASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm7837-201ENSMUST00000190873 412 ntBASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm16419-201ENSMUST00000221057 625 ntBASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm23296-201ENSMUST00000082555 107 ntBASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm24859-201ENSMUST00000082729 107 ntBASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm29161-201ENSMUST00000188250 699 ntBASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm36382-201ENSMUST00000198892 541 ntBASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm44966-201ENSMUST00000208096 157 ntBASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm42611-201ENSMUST00000199446 3407 ntBASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Gm37862-201ENSMUST00000193079 2533 ntBASIC3.1□□□□□ -1.91
Col6a6Q8C6K9 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC3.09□□□□□ -1.91
Col6a6Q8C6K9 Gm13924-201ENSMUST00000119899 486 ntBASIC3.09□□□□□ -1.91
Col6a6Q8C6K9 Mir3058-201ENSMUST00000175126 91 ntBASIC3.09□□□□□ -1.91
Col6a6Q8C6K9 Gm28803-201ENSMUST00000190385 764 ntBASIC3.09□□□□□ -1.91
Col6a6Q8C6K9 Gm7439-201ENSMUST00000214053 835 ntBASIC3.09□□□□□ -1.91
Col6a6Q8C6K9 Gm6841-201ENSMUST00000220602 598 ntBASIC3.09□□□□□ -1.91
Col6a6Q8C6K9 AC164597.2-201ENSMUST00000226738 603 ntBASIC3.09□□□□□ -1.91
Col6a6Q8C6K9 AC127371.1-201ENSMUST00000228516 312 ntBASIC3.09□□□□□ -1.91
Col6a6Q8C6K9 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Col6a6Q8C6K9 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Col6a6Q8C6K9 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Col6a6Q8C6K9 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.09□□□□□ -1.91
Col6a6Q8C6K9 Gm3665-201ENSMUST00000177214 2461 ntBASIC3.09□□□□□ -1.91
Col6a6Q8C6K9 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Col6a6Q8C6K9 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Col6a6Q8C6K9 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.09□□□□□ -1.91
Col6a6Q8C6K9 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Col6a6Q8C6K9 AC153969.1-201ENSMUST00000214047 2605 ntBASIC3.09□□□□□ -1.91
Col6a6Q8C6K9 AC164102.1-201ENSMUST00000220524 1553 ntBASIC3.09□□□□□ -1.91
Col6a6Q8C6K9 Gm13100-201ENSMUST00000117157 1439 ntBASIC3.09□□□□□ -1.91
Col6a6Q8C6K9 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
Col6a6Q8C6K9 Mir676-201ENSMUST00000102443 89 ntBASIC3.09□□□□□ -1.92
Col6a6Q8C6K9 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC3.09□□□□□ -1.92
Col6a6Q8C6K9 Gm22956-201ENSMUST00000122520 80 ntBASIC3.09□□□□□ -1.92
Col6a6Q8C6K9 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
Col6a6Q8C6K9 Gm23591-201ENSMUST00000157663 286 ntBASIC3.09□□□□□ -1.92
Col6a6Q8C6K9 Gm25373-201ENSMUST00000158156 115 ntBASIC3.09□□□□□ -1.92
Col6a6Q8C6K9 Gm4207-201ENSMUST00000173144 960 ntBASIC3.09□□□□□ -1.92
Col6a6Q8C6K9 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Col6a6Q8C6K9 Gm6445-201ENSMUST00000189515 1112 ntBASIC3.09□□□□□ -1.92
Col6a6Q8C6K9 Gm43717-201ENSMUST00000198684 310 ntBASIC3.09□□□□□ -1.92
Col6a6Q8C6K9 Olfr1309-201ENSMUST00000207885 964 ntBASIC3.09□□□□□ -1.92
Col6a6Q8C6K9 Gm18672-201ENSMUST00000208035 270 ntBASIC3.09□□□□□ -1.92
Col6a6Q8C6K9 Gm8106-201ENSMUST00000213123 523 ntBASIC3.09□□□□□ -1.92
Col6a6Q8C6K9 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC3.09□□□□□ -1.92
Col6a6Q8C6K9 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.09□□□□□ -1.92
Col6a6Q8C6K9 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.09□□□□□ -1.92
Col6a6Q8C6K9 Gm23302-201ENSMUST00000082710 100 ntBASIC3.09□□□□□ -1.92
Col6a6Q8C6K9 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Col6a6Q8C6K9 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC3.09□□□□□ -1.92
Col6a6Q8C6K9 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 Gm28069-201ENSMUST00000189926 214 ntBASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 Gm42621-201ENSMUST00000198114 275 ntBASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 Gm44526-201ENSMUST00000204664 121 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms