Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm19418-201ENSMUST00000197436 580 ntBASIC3.33□□□□□ -1.88
Col12a1Q60847 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col12a1Q60847 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.33□□□□□ -1.88
Col12a1Q60847 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col12a1Q60847 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.33□□□□□ -1.88
Col12a1Q60847 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
Col12a1Q60847 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC3.33□□□□□ -1.88
Col12a1Q60847 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
Col12a1Q60847 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Col12a1Q60847 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col12a1Q60847 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col12a1Q60847 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC3.33□□□□□ -1.88
Col12a1Q60847 Gm8129-201ENSMUST00000118230 213 ntBASIC3.33□□□□□ -1.88
Col12a1Q60847 Gm23791-201ENSMUST00000122553 293 ntBASIC3.33□□□□□ -1.88
Col12a1Q60847 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.33□□□□□ -1.88
Col12a1Q60847 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.33□□□□□ -1.88
Col12a1Q60847 Gm6303-201ENSMUST00000210123 471 ntBASIC3.33□□□□□ -1.88
Col12a1Q60847 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.33□□□□□ -1.88
Col12a1Q60847 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Col12a1Q60847 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
Col12a1Q60847 Gm37862-201ENSMUST00000193079 2533 ntBASIC3.33□□□□□ -1.88
Col12a1Q60847 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC3.33□□□□□ -1.88
Col12a1Q60847 Gm22551-201ENSMUST00000157795 103 ntBASIC3.33□□□□□ -1.88
Col12a1Q60847 Gm28594-201ENSMUST00000187022 661 ntBASIC3.33□□□□□ -1.88
Col12a1Q60847 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Col12a1Q60847 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col12a1Q60847 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col12a1Q60847 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Col12a1Q60847 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC3.32□□□□□ -1.88
Col12a1Q60847 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Col12a1Q60847 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Col12a1Q60847 Gm11456-201ENSMUST00000121070 256 ntBASIC3.32□□□□□ -1.88
Col12a1Q60847 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.32□□□□□ -1.88
Col12a1Q60847 Gm23753-201ENSMUST00000157575 149 ntBASIC3.32□□□□□ -1.88
Col12a1Q60847 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col12a1Q60847 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.32□□□□□ -1.88
Col12a1Q60847 Gm5066-201ENSMUST00000188479 822 ntBASIC3.32□□□□□ -1.88
Col12a1Q60847 Gm37533-201ENSMUST00000193848 545 ntBASIC3.32□□□□□ -1.88
Col12a1Q60847 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.32□□□□□ -1.88
Col12a1Q60847 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col12a1Q60847 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Col12a1Q60847 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Col12a1Q60847 Gm20276-201ENSMUST00000216122 2648 ntBASIC3.32□□□□□ -1.88
Col12a1Q60847 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.32□□□□□ -1.88
Col12a1Q60847 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Col12a1Q60847 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Col12a1Q60847 Gm8600-201ENSMUST00000186320 905 ntBASIC3.32□□□□□ -1.88
Col12a1Q60847 Gm37741-201ENSMUST00000191768 1256 ntBASIC3.32□□□□□ -1.88
Col12a1Q60847 Gm37575-201ENSMUST00000195467 309 ntBASIC3.32□□□□□ -1.88
Col12a1Q60847 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col12a1Q60847 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col12a1Q60847 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.32□□□□□ -1.88
Col12a1Q60847 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col12a1Q60847 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.31□□□□□ -1.88
Col12a1Q60847 Gm22187-201ENSMUST00000157819 129 ntBASIC3.31□□□□□ -1.88
Col12a1Q60847 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.31□□□□□ -1.88
Col12a1Q60847 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.31□□□□□ -1.88
Col12a1Q60847 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.31□□□□□ -1.88
Col12a1Q60847 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.31□□□□□ -1.88
Col12a1Q60847 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.31□□□□□ -1.88
Col12a1Q60847 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.31□□□□□ -1.88
Col12a1Q60847 Gm6842-201ENSMUST00000211361 390 ntBASIC3.31□□□□□ -1.88
Col12a1Q60847 Olfr1153-201ENSMUST00000052300 957 ntBASIC3.31□□□□□ -1.88
Col12a1Q60847 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col12a1Q60847 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Col12a1Q60847 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.31□□□□□ -1.88
Col12a1Q60847 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col12a1Q60847 Gm13650-201ENSMUST00000117729 433 ntBASIC3.31□□□□□ -1.88
Col12a1Q60847 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Col12a1Q60847 Gm25037-201ENSMUST00000175418 110 ntBASIC3.31□□□□□ -1.88
Col12a1Q60847 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Col12a1Q60847 Gm27254-201ENSMUST00000183926 517 ntBASIC3.31□□□□□ -1.88
Col12a1Q60847 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Col12a1Q60847 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.31□□□□□ -1.88
Col12a1Q60847 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
Col12a1Q60847 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
Col12a1Q60847 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col12a1Q60847 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col12a1Q60847 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Col12a1Q60847 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC3.31□□□□□ -1.88
Col12a1Q60847 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.3□□□□□ -1.88
Col12a1Q60847 Gm12998-201ENSMUST00000122445 789 ntBASIC3.3□□□□□ -1.88
Col12a1Q60847 Gm24958-201ENSMUST00000158009 97 ntBASIC3.3□□□□□ -1.88
Col12a1Q60847 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col12a1Q60847 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Col12a1Q60847 Gm43227-201ENSMUST00000202239 677 ntBASIC3.3□□□□□ -1.88
Col12a1Q60847 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col12a1Q60847 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.3□□□□□ -1.88
Col12a1Q60847 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col12a1Q60847 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col12a1Q60847 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col12a1Q60847 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col12a1Q60847 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Col12a1Q60847 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col12a1Q60847 Gm6140-201ENSMUST00000192494 966 ntBASIC3.3□□□□□ -1.88
Col12a1Q60847 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col12a1Q60847 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col12a1Q60847 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Col12a1Q60847 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.3□□□□□ -1.88
Col12a1Q60847 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms