Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm35558-203ENSMUST00000222264 204 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 AC115878.1-201ENSMUST00000227247 334 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm22220-201ENSMUST00000082671 149 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a1Q04857 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a1Q04857 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a1Q04857 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a1Q04857 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a1Q04857 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col6a1Q04857 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a1Q04857 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a1Q04857 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a1Q04857 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a1Q04857 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Col6a1Q04857 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm6893-201ENSMUST00000118385 522 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm14001-201ENSMUST00000118847 247 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm12466-201ENSMUST00000121199 620 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm11761-201ENSMUST00000121392 445 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm13356-201ENSMUST00000121678 335 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm6058-201ENSMUST00000154261 399 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm23534-201ENSMUST00000157539 97 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm24188-201ENSMUST00000157980 108 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm6264-202ENSMUST00000162896 1217 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm27640-201ENSMUST00000184580 147 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm44468-201ENSMUST00000199516 105 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm44307-201ENSMUST00000204466 764 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm44134-202ENSMUST00000204777 545 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col6a1Q04857 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC5.85□□□□□ -1.47
Col6a1Q04857 AC161758.1-201ENSMUST00000226123 310 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 AC154598.1-201ENSMUST00000227079 347 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm23404-201ENSMUST00000082543 97 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm25793-201ENSMUST00000083287 107 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 Snord38a-201ENSMUST00000083746 71 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm23796-201ENSMUST00000084011 160 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col6a1Q04857 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col6a1Q04857 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a1Q04857 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.85□□□□□ -1.47
Col6a1Q04857 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a1Q04857 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Col6a1Q04857 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm43886-201ENSMUST00000205039 2386 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.85□□□□□ -1.47
Col6a1Q04857 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a1Q04857 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.84□□□□□ -1.47
Col6a1Q04857 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a1Q04857 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Col6a1Q04857 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a1Q04857 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.84□□□□□ -1.47
Col6a1Q04857 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a1Q04857 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a1Q04857 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a1Q04857 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a1Q04857 Gm24350-201ENSMUST00000104163 133 ntBASIC5.84□□□□□ -1.47
Col6a1Q04857 Gm11898-201ENSMUST00000117161 385 ntBASIC5.84□□□□□ -1.47
Col6a1Q04857 Gm14874-201ENSMUST00000118995 438 ntBASIC5.84□□□□□ -1.47
Col6a1Q04857 Gm14605-201ENSMUST00000120599 268 ntBASIC5.84□□□□□ -1.47
Col6a1Q04857 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a1Q04857 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a1Q04857 Gm26153-201ENSMUST00000157433 127 ntBASIC5.84□□□□□ -1.47
Col6a1Q04857 Gm25335-201ENSMUST00000158043 103 ntBASIC5.84□□□□□ -1.47
Col6a1Q04857 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.84□□□□□ -1.47
Col6a1Q04857 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.84□□□□□ -1.47
Col6a1Q04857 Gm22646-201ENSMUST00000175130 115 ntBASIC5.84□□□□□ -1.47
Col6a1Q04857 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC5.84□□□□□ -1.47
Col6a1Q04857 Gm37658-201ENSMUST00000192672 315 ntBASIC5.84□□□□□ -1.47
Col6a1Q04857 Gm38046-201ENSMUST00000192733 550 ntBASIC5.84□□□□□ -1.47
Col6a1Q04857 Gm37164-201ENSMUST00000192809 637 ntBASIC5.84□□□□□ -1.47
Col6a1Q04857 Gm37586-201ENSMUST00000193654 204 ntBASIC5.84□□□□□ -1.47
Col6a1Q04857 Gm2676-201ENSMUST00000207279 606 ntBASIC5.84□□□□□ -1.47
Col6a1Q04857 AC162931.1-201ENSMUST00000214184 267 ntBASIC5.84□□□□□ -1.47
Col6a1Q04857 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC5.84□□□□□ -1.47
Col6a1Q04857 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.84□□□□□ -1.47
Col6a1Q04857 Gm17915-201ENSMUST00000222077 548 ntBASIC5.84□□□□□ -1.47
Col6a1Q04857 Gm44668-201ENSMUST00000207911 3265 ntBASIC5.84□□□□□ -1.47
Col6a1Q04857 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a1Q04857 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms