Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.24□□□□□ -1.89
Nkx3-1P97436 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.24□□□□□ -1.89
Nkx3-1P97436 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC3.24□□□□□ -1.89
Nkx3-1P97436 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.24□□□□□ -1.89
Nkx3-1P97436 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Nkx3-1P97436 Gm5185-201ENSMUST00000080271 619 ntBASIC3.24□□□□□ -1.89
Nkx3-1P97436 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
Nkx3-1P97436 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
Nkx3-1P97436 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
Nkx3-1P97436 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Nkx3-1P97436 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Nkx3-1P97436 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.24□□□□□ -1.89
Nkx3-1P97436 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
Nkx3-1P97436 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Nkx3-1P97436 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.24□□□□□ -1.89
Nkx3-1P97436 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
Nkx3-1P97436 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Nkx3-1P97436 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Nkx3-1P97436 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Nkx3-1P97436 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Nkx3-1P97436 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Nkx3-1P97436 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Nkx3-1P97436 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Nkx3-1P97436 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Nkx3-1P97436 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Nkx3-1P97436 Gm22115-201ENSMUST00000103976 133 ntBASIC3.23□□□□□ -1.89
Nkx3-1P97436 Gm23923-201ENSMUST00000104108 133 ntBASIC3.23□□□□□ -1.89
Nkx3-1P97436 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Nkx3-1P97436 Gm12691-201ENSMUST00000120186 456 ntBASIC3.23□□□□□ -1.89
Nkx3-1P97436 Gm12005-201ENSMUST00000121451 379 ntBASIC3.23□□□□□ -1.89
Nkx3-1P97436 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.23□□□□□ -1.89
Nkx3-1P97436 Gm23667-201ENSMUST00000157466 120 ntBASIC3.23□□□□□ -1.89
Nkx3-1P97436 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.23□□□□□ -1.89
Nkx3-1P97436 Gm26556-201ENSMUST00000180645 320 ntBASIC3.23□□□□□ -1.89
Nkx3-1P97436 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.23□□□□□ -1.89
Nkx3-1P97436 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.23□□□□□ -1.89
Nkx3-1P97436 Gm37355-201ENSMUST00000193345 606 ntBASIC3.23□□□□□ -1.89
Nkx3-1P97436 Gm19726-201ENSMUST00000205008 240 ntBASIC3.23□□□□□ -1.89
Nkx3-1P97436 Gm17989-201ENSMUST00000211543 412 ntBASIC3.23□□□□□ -1.89
Nkx3-1P97436 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.23□□□□□ -1.89
Nkx3-1P97436 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.23□□□□□ -1.89
Nkx3-1P97436 AC130547.1-201ENSMUST00000228079 1047 ntBASIC3.23□□□□□ -1.89
Nkx3-1P97436 Gm24626-201ENSMUST00000082621 161 ntBASIC3.23□□□□□ -1.89
Nkx3-1P97436 Gm25480-201ENSMUST00000083217 133 ntBASIC3.23□□□□□ -1.89
Nkx3-1P97436 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Nkx3-1P97436 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.23□□□□□ -1.89
Nkx3-1P97436 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Nkx3-1P97436 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Nkx3-1P97436 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm3665-201ENSMUST00000177214 2461 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Nkx3-1P97436 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm26387-201ENSMUST00000104238 132 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Nkx3-1P97436 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm13788-201ENSMUST00000120767 601 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm12276-201ENSMUST00000121709 301 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm13868-201ENSMUST00000122411 294 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm12226-201ENSMUST00000144172 876 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm22380-201ENSMUST00000157479 95 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm23702-201ENSMUST00000158840 130 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm16026-202ENSMUST00000159695 772 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Nkx3-1P97436 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm28010-201ENSMUST00000179485 126 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Nkx3-1P97436 Mir6715-201ENSMUST00000184990 57 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm28975-201ENSMUST00000186412 686 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm3496-201ENSMUST00000188283 745 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm28920-201ENSMUST00000189957 699 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm36934-201ENSMUST00000192007 306 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Trbv8-201ENSMUST00000194020 285 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm38332-201ENSMUST00000194189 147 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm38008-201ENSMUST00000195333 518 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm45080-201ENSMUST00000206648 283 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm45483-201ENSMUST00000209845 1682 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.22□□□□□ -1.89
Nkx3-1P97436 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Nkx3-1P97436 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Nkx3-1P97436 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Nkx3-1P97436 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Nkx3-1P97436 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Nkx3-1P97436 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Nkx3-1P97436 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Nkx3-1P97436 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Nkx3-1P97436 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms