Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC5.63□□□□□ -1.51
Sox1P53783 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sox1P53783 Gm22621-201ENSMUST00000179678 74 ntBASIC5.63□□□□□ -1.51
Sox1P53783 Gm28685-201ENSMUST00000187545 1101 ntBASIC5.63□□□□□ -1.51
Sox1P53783 Gm37495-201ENSMUST00000194590 264 ntBASIC5.63□□□□□ -1.51
Sox1P53783 Gm5284-201ENSMUST00000199053 903 ntBASIC5.63□□□□□ -1.51
Sox1P53783 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC5.63□□□□□ -1.51
Sox1P53783 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC5.63□□□□□ -1.51
Sox1P53783 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC5.63□□□□□ -1.51
Sox1P53783 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.63□□□□□ -1.51
Sox1P53783 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.63□□□□□ -1.51
Sox1P53783 AC166341.3-201ENSMUST00000221861 114 ntBASIC5.63□□□□□ -1.51
Sox1P53783 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.63□□□□□ -1.51
Sox1P53783 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sox1P53783 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Sox1P53783 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC5.63□□□□□ -1.51
Sox1P53783 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.63□□□□□ -1.51
Sox1P53783 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sox1P53783 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sox1P53783 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Sox1P53783 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox1P53783 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.63□□□□□ -1.51
Sox1P53783 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.63□□□□□ -1.51
Sox1P53783 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
Sox1P53783 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox1P53783 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox1P53783 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox1P53783 Gm23424-201ENSMUST00000103889 110 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Gm9850-201ENSMUST00000117916 227 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Gm25176-201ENSMUST00000122640 125 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Gm24745-201ENSMUST00000157840 85 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Gm23016-201ENSMUST00000158431 62 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Mir5128-201ENSMUST00000175217 84 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Gm18953-201ENSMUST00000175694 300 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Gm29231-201ENSMUST00000179850 319 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Gm8649-201ENSMUST00000181799 233 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Gm28951-201ENSMUST00000190742 313 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Gm38167-201ENSMUST00000195704 1178 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sox1P53783 Gm2623-201ENSMUST00000199229 286 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Gm45173-201ENSMUST00000206819 305 ntBASIC5.62□□□□□ -1.51
Sox1P53783 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC5.62□□□□□ -1.51
Sox1P53783 Gm21112-201ENSMUST00000212224 578 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Gm7760-201ENSMUST00000212265 578 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Gm7807-201ENSMUST00000212475 578 ntBASIC5.62□□□□□ -1.51
Sox1P53783 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sox1P53783 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Gm31849-201ENSMUST00000220306 375 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.62□□□□□ -1.51
Sox1P53783 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.62□□□□□ -1.51
Sox1P53783 Gm20102-201ENSMUST00000222445 220 ntBASIC5.62□□□□□ -1.51
Sox1P53783 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox1P53783 Olfr203-201ENSMUST00000089305 924 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox1P53783 Gm44078-201ENSMUST00000204652 2646 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Gm37186-201ENSMUST00000195629 2861 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Sox1P53783 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox1P53783 Gm40020-201ENSMUST00000215677 1635 ntBASIC5.62□□□□□ -1.51
Sox1P53783 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox1P53783 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Sox1P53783 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox1P53783 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Sox1P53783 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sox1P53783 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.62□□□□□ -1.51
Sox1P53783 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
Sox1P53783 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox1P53783 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sox1P53783 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sox1P53783 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.61□□□□□ -1.51
Sox1P53783 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sox1P53783 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sox1P53783 Gm10936-201ENSMUST00000105264 252 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Gm25316-201ENSMUST00000116826 118 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox1P53783 Gm7079-201ENSMUST00000119726 171 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sox1P53783 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sox1P53783 Gm22597-201ENSMUST00000157602 80 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Gm22725-201ENSMUST00000158092 110 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Gm15812-201ENSMUST00000162331 748 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Sox1P53783 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Gm21232-201ENSMUST00000182187 1006 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Gm8816-201ENSMUST00000182280 1163 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Gm36891-201ENSMUST00000191995 655 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Gm37961-201ENSMUST00000192729 299 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.61□□□□□ -1.51
Sox1P53783 Ighv12-1-201ENSMUST00000195542 329 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Gm42542-201ENSMUST00000197978 268 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Gm43804-201ENSMUST00000198280 456 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Gm36382-201ENSMUST00000198892 541 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC5.61□□□□□ -1.51
Sox1P53783 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.61□□□□□ -1.51
Sox1P53783 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
Sox1P53783 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms