Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm23691-201ENSMUST00000101878 107 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm26384-201ENSMUST00000102183 110 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm24120-201ENSMUST00000103978 129 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm24430-201ENSMUST00000104077 104 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm15012-201ENSMUST00000119176 106 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm16259-201ENSMUST00000145241 553 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm24551-201ENSMUST00000158645 92 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm3053-201ENSMUST00000161709 616 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Mir3112-201ENSMUST00000175431 82 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm27849-201ENSMUST00000183673 125 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm29550-201ENSMUST00000185543 285 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm28802-201ENSMUST00000188624 944 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm29454-201ENSMUST00000190805 393 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm10292-202ENSMUST00000193165 585 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm20056-201ENSMUST00000194813 519 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm44349-201ENSMUST00000197048 123 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm19253-201ENSMUST00000204279 307 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm17737-201ENSMUST00000210183 1147 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 AC153541.1-201ENSMUST00000213786 294 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 AC165283.1-201ENSMUST00000223390 307 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 AC158142.1-201ENSMUST00000226721 416 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Mir99a-201ENSMUST00000083596 65 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Gm36927-201ENSMUST00000192504 1841 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Ddx56Q9D0R4 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Ddx56Q9D0R4 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Ddx56Q9D0R4 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Ddx56Q9D0R4 Mir667-201ENSMUST00000102441 92 ntBASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 n-R5s16-201ENSMUST00000104555 119 ntBASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Mir883a-201ENSMUST00000104824 76 ntBASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Gm13162-201ENSMUST00000121481 454 ntBASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Gm24910-201ENSMUST00000157289 272 ntBASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Gm20415-201ENSMUST00000172877 423 ntBASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Mir7037-201ENSMUST00000184414 65 ntBASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Gm28660-201ENSMUST00000186496 253 ntBASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Gm17929-201ENSMUST00000186851 627 ntBASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Gm29600-201ENSMUST00000188687 377 ntBASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Gm43144-201ENSMUST00000198256 485 ntBASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Gm32536-201ENSMUST00000205209 445 ntBASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Gm44648-201ENSMUST00000208267 329 ntBASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 CT010455.1-201ENSMUST00000218579 413 ntBASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 AC122924.2-201ENSMUST00000220799 298 ntBASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Gm18441-201ENSMUST00000223539 617 ntBASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 AC131745.2-201ENSMUST00000225736 565 ntBASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.15□□□□□ -1.59
Ddx56Q9D0R4 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms