Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm43313-201ENSMUST00000201398 2235 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm23910-201ENSMUST00000104597 132 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm8475-201ENSMUST00000118211 526 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm11409-201ENSMUST00000118621 403 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm4989-201ENSMUST00000118711 749 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm6175-201ENSMUST00000121351 400 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm22960-201ENSMUST00000122517 104 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm23250-201ENSMUST00000157444 267 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm23669-201ENSMUST00000157470 128 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm23538-201ENSMUST00000157535 101 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm23660-201ENSMUST00000178362 79 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm24088-201ENSMUST00000179100 79 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm8649-201ENSMUST00000181799 233 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm37308-201ENSMUST00000194684 100 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm44419-201ENSMUST00000203338 229 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm45156-201ENSMUST00000207255 439 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm45249-201ENSMUST00000211021 348 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm7990-201ENSMUST00000212126 593 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 AC123832.2-201ENSMUST00000215151 129 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 AC145736.2-201ENSMUST00000216305 365 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm10092-201ENSMUST00000077110 180 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 n-R5s65-201ENSMUST00000082614 117 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm24207-201ENSMUST00000082781 108 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Gm44678-201ENSMUST00000207828 2775 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 AC124516.1-201ENSMUST00000221845 3544 ntBASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Gm25919-201ENSMUST00000104271 132 ntBASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Gm24889-201ENSMUST00000104388 132 ntBASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Gm12871-201ENSMUST00000118758 438 ntBASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Gm13363-201ENSMUST00000122008 522 ntBASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Gm15147-201ENSMUST00000122263 483 ntBASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Gm25489-201ENSMUST00000158727 141 ntBASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6.32□□□□□ -1.4
Trim47Q8C0E3 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Gm9722-201ENSMUST00000194568 802 ntBASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Gm19726-201ENSMUST00000205008 240 ntBASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Gm44795-201ENSMUST00000205496 319 ntBASIC6.32□□□□□ -1.4
Trim47Q8C0E3 AC165157.3-201ENSMUST00000220815 103 ntBASIC6.32□□□□□ -1.4
Trim47Q8C0E3 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Gm37999-201ENSMUST00000195178 1809 ntBASIC6.32□□□□□ -1.4
Trim47Q8C0E3 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim47Q8C0E3 Gm44078-201ENSMUST00000204652 2646 ntBASIC6.31□□□□□ -1.4
Trim47Q8C0E3 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Gm37244-201ENSMUST00000191748 1981 ntBASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Gm15084-201ENSMUST00000178585 1502 ntBASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 126.4 ms