Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim56Q80VI1 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Trim56Q80VI1 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim56Q80VI1 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim56Q80VI1 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Trim56Q80VI1 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim56Q80VI1 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Gm42496-201ENSMUST00000197976 3241 ntBASIC6.01□□□□□ -1.45
Trim56Q80VI1 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Gm37217-201ENSMUST00000194017 3521 ntBASIC6.01□□□□□ -1.45
Trim56Q80VI1 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Gm23465-201ENSMUST00000157134 262 ntBASIC6.01□□□□□ -1.45
Trim56Q80VI1 Gm8338-201ENSMUST00000163928 363 ntBASIC6.01□□□□□ -1.45
Trim56Q80VI1 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC6.01□□□□□ -1.45
Trim56Q80VI1 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC6.01□□□□□ -1.45
Trim56Q80VI1 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC6.01□□□□□ -1.45
Trim56Q80VI1 AL645522.1-201ENSMUST00000197692 104 ntBASIC6.01□□□□□ -1.45
Trim56Q80VI1 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Gm43968-201ENSMUST00000203388 389 ntBASIC6.01□□□□□ -1.45
Trim56Q80VI1 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Gm18703-201ENSMUST00000215318 333 ntBASIC6.01□□□□□ -1.45
Trim56Q80VI1 Gm19219-201ENSMUST00000215863 724 ntBASIC6.01□□□□□ -1.45
Trim56Q80VI1 AC153729.4-201ENSMUST00000217582 3826 ntBASIC6.01□□□□□ -1.45
Trim56Q80VI1 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC6.01□□□□□ -1.45
Trim56Q80VI1 AC135377.1-201ENSMUST00000223692 463 ntBASIC6.01□□□□□ -1.45
Trim56Q80VI1 AC127371.1-201ENSMUST00000228516 312 ntBASIC6.01□□□□□ -1.45
Trim56Q80VI1 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Gm9845-201ENSMUST00000056409 598 ntBASIC6.01□□□□□ -1.45
Trim56Q80VI1 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6.01□□□□□ -1.45
Trim56Q80VI1 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim56Q80VI1 AC152944.1-201ENSMUST00000220160 3101 ntBASIC6.01□□□□□ -1.45
Trim56Q80VI1 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Trim56Q80VI1 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
Trim56Q80VI1 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim56Q80VI1 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trim56Q80VI1 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
Trim56Q80VI1 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim56Q80VI1 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6□□□□□ -1.45
Trim56Q80VI1 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim56Q80VI1 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim56Q80VI1 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim56Q80VI1 Snord116l9-201ENSMUST00000101891 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm26504-201ENSMUST00000102033 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Mir883a-201ENSMUST00000104824 76 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm22819-201ENSMUST00000157445 303 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim56Q80VI1 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC6□□□□□ -1.45
Trim56Q80VI1 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim56Q80VI1 Gm22258-201ENSMUST00000177645 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm26502-201ENSMUST00000177732 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Snord116l13-201ENSMUST00000177737 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm25350-201ENSMUST00000177849 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim56Q80VI1 Snord116l15-201ENSMUST00000177940 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm23446-201ENSMUST00000177977 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Snord116l4-201ENSMUST00000177982 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm26201-201ENSMUST00000178047 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm24711-201ENSMUST00000178062 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim56Q80VI1 Gm24609-201ENSMUST00000178166 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm23265-201ENSMUST00000178321 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm22812-201ENSMUST00000178329 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Snord116l3-201ENSMUST00000178370 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm26246-201ENSMUST00000178388 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm22131-201ENSMUST00000178415 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm25155-201ENSMUST00000178450 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm24760-201ENSMUST00000178530 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm26032-201ENSMUST00000178535 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm22285-201ENSMUST00000178576 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm22417-201ENSMUST00000178656 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim56Q80VI1 Snord116l2-201ENSMUST00000178675 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm26270-201ENSMUST00000178690 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim56Q80VI1 Snord116l16-201ENSMUST00000178777 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm25074-201ENSMUST00000178782 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm25210-201ENSMUST00000178813 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm2092-201ENSMUST00000178887 639 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm25157-201ENSMUST00000178914 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm23313-201ENSMUST00000178931 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Snord116l17-201ENSMUST00000178936 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm23089-201ENSMUST00000178947 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms