Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm15946-201ENSMUST00000160654 423 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sox9Q04887 Fth-ps2-201ENSMUST00000168364 516 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sox9Q04887 Gm17153-201ENSMUST00000171314 490 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC5.28□□□□□ -1.56
Sox9Q04887 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Sox9Q04887 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Sox9Q04887 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Sox9Q04887 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Sox9Q04887 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Sox9Q04887 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sox9Q04887 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sox9Q04887 Gm9892-201ENSMUST00000182415 992 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Mir496b-201ENSMUST00000184935 113 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Gm27414-201ENSMUST00000185033 381 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sox9Q04887 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC5.28□□□□□ -1.56
Sox9Q04887 Gm28957-201ENSMUST00000190174 373 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Gm28872-201ENSMUST00000191518 158 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sox9Q04887 Gm20162-201ENSMUST00000193629 871 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC5.28□□□□□ -1.56
Sox9Q04887 Gm44726-201ENSMUST00000203427 217 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Gm43892-201ENSMUST00000204373 265 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.28□□□□□ -1.56
Sox9Q04887 AC161456.1-201ENSMUST00000206771 887 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Gm44754-201ENSMUST00000208155 400 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Gm45366-201ENSMUST00000209828 384 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC5.28□□□□□ -1.56
Sox9Q04887 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC5.28□□□□□ -1.56
Sox9Q04887 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sox9Q04887 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC5.28□□□□□ -1.56
Sox9Q04887 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC5.28□□□□□ -1.56
Sox9Q04887 AC131720.2-201ENSMUST00000220420 431 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sox9Q04887 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Sox9Q04887 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sox9Q04887 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sox9Q04887 Gm23242-201ENSMUST00000083055 107 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Gm24928-201ENSMUST00000083399 107 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Gm25897-201ENSMUST00000083709 107 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sox9Q04887 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sox9Q04887 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sox9Q04887 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Sox9Q04887 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sox9Q04887 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sox9Q04887 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sox9Q04887 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sox9Q04887 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
Sox9Q04887 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sox9Q04887 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sox9Q04887 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Sox9Q04887 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sox9Q04887 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sox9Q04887 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.28□□□□□ -1.56
Sox9Q04887 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sox9Q04887 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sox9Q04887 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Sox9Q04887 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sox9Q04887 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 AC115891.1-201ENSMUST00000215798 1755 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sox9Q04887 Gm25213-201ENSMUST00000102388 113 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 Gm23593-201ENSMUST00000104309 120 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 Mir208b-201ENSMUST00000104735 77 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 Gm11488-201ENSMUST00000117277 863 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 Gm12492-201ENSMUST00000117665 564 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 Mup-ps12-201ENSMUST00000126217 549 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Sox9Q04887 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.27□□□□□ -1.57
Sox9Q04887 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.27□□□□□ -1.57
Sox9Q04887 Gm25559-201ENSMUST00000157182 74 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 Gm23905-201ENSMUST00000157568 109 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 Gm25520-201ENSMUST00000158389 118 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 Gm25348-201ENSMUST00000158961 111 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 Gm3084-201ENSMUST00000169967 598 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC5.27□□□□□ -1.57
Sox9Q04887 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC5.27□□□□□ -1.57
Sox9Q04887 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.27□□□□□ -1.57
Sox9Q04887 Gm8939-201ENSMUST00000192577 964 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 Gm37119-201ENSMUST00000195691 389 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 Gm43513-201ENSMUST00000199779 1076 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 Gm43604-201ENSMUST00000199799 705 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.27□□□□□ -1.57
Sox9Q04887 Gm44946-201ENSMUST00000208425 572 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sox9Q04887 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.27□□□□□ -1.57
Sox9Q04887 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Sox9Q04887 AC124586.1-201ENSMUST00000221673 2795 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 AC174797.3-202ENSMUST00000224578 587 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 AC156790.5-201ENSMUST00000227075 231 ntBASIC5.27□□□□□ -1.57
Sox9Q04887 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Sox9Q04887 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sox9Q04887 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms