Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a1Q04857 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Col6a1Q04857 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a1Q04857 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a1Q04857 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a1Q04857 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm22020-201ENSMUST00000104358 136 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm24275-201ENSMUST00000116780 146 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm23839-201ENSMUST00000116957 109 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm12803-201ENSMUST00000118907 821 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm15231-201ENSMUST00000119174 447 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm12876-201ENSMUST00000120975 408 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm14732-201ENSMUST00000121372 545 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm22479-201ENSMUST00000122566 81 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm22160-201ENSMUST00000158405 328 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Scarna10-201ENSMUST00000158992 325 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm19898-201ENSMUST00000177490 251 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm21070-201ENSMUST00000182425 985 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm4832-201ENSMUST00000182679 399 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC5.87□□□□□ -1.47
Col6a1Q04857 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm29332-201ENSMUST00000190829 227 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Mir142-201ENSMUST00000198092 64 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm43669-201ENSMUST00000198229 436 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm45081-201ENSMUST00000206281 572 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm44818-201ENSMUST00000206608 358 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm45375-201ENSMUST00000210338 280 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 AC122905.2-201ENSMUST00000220325 269 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a1Q04857 AC167192.2-201ENSMUST00000224794 198 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Olfr1193-201ENSMUST00000081697 957 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm22365-201ENSMUST00000093750 117 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a1Q04857 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a1Q04857 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Col6a1Q04857 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 AC162910.1-201ENSMUST00000221219 1723 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 AW046200-203ENSMUST00000211787 2479 ntBASIC5.87□□□□□ -1.47
Col6a1Q04857 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a1Q04857 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a1Q04857 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a1Q04857 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a1Q04857 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col6a1Q04857 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a1Q04857 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Col6a1Q04857 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a1Q04857 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a1Q04857 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a1Q04857 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a1Q04857 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a1Q04857 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm25418-201ENSMUST00000104214 129 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm12850-201ENSMUST00000119210 436 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm16100-201ENSMUST00000120489 231 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm4852-201ENSMUST00000121202 729 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm25294-201ENSMUST00000122791 104 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm24737-201ENSMUST00000158861 100 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm3531-201ENSMUST00000162698 489 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Mir7074-201ENSMUST00000183884 63 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm27660-201ENSMUST00000184028 208 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 Mir6933-201ENSMUST00000184982 81 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm19206-201ENSMUST00000186401 827 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm28058-201ENSMUST00000186421 264 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm5058-201ENSMUST00000187331 463 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm38234-201ENSMUST00000195204 421 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm44295-201ENSMUST00000203805 437 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.86□□□□□ -1.47
Col6a1Q04857 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC5.86□□□□□ -1.47
Col6a1Q04857 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms