Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NcanP55066 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NcanP55066 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NcanP55066 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.43□□□□□ -1.7
NcanP55066 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NcanP55066 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NcanP55066 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC4.43□□□□□ -1.7
NcanP55066 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NcanP55066 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NcanP55066 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.42□□□□□ -1.7
NcanP55066 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
NcanP55066 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NcanP55066 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC4.42□□□□□ -1.7
NcanP55066 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
NcanP55066 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NcanP55066 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.42□□□□□ -1.7
NcanP55066 Gm14385-201ENSMUST00000116315 876 ntBASIC4.42□□□□□ -1.7
NcanP55066 Gm11673-201ENSMUST00000117846 331 ntBASIC4.42□□□□□ -1.7
NcanP55066 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NcanP55066 Gm12577-201ENSMUST00000119701 574 ntBASIC4.42□□□□□ -1.7
NcanP55066 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NcanP55066 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC4.42□□□□□ -1.7
NcanP55066 Gm28591-201ENSMUST00000185259 183 ntBASIC4.42□□□□□ -1.7
NcanP55066 Gm28967-201ENSMUST00000187351 281 ntBASIC4.42□□□□□ -1.7
NcanP55066 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC4.42□□□□□ -1.7
NcanP55066 Gm44223-201ENSMUST00000204854 114 ntBASIC4.42□□□□□ -1.7
NcanP55066 Gm44845-201ENSMUST00000208773 335 ntBASIC4.42□□□□□ -1.7
NcanP55066 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
NcanP55066 Gm3565-201ENSMUST00000222670 609 ntBASIC4.42□□□□□ -1.7
NcanP55066 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.42□□□□□ -1.7
NcanP55066 AC115291.1-201ENSMUST00000226803 258 ntBASIC4.42□□□□□ -1.7
NcanP55066 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.42□□□□□ -1.7
NcanP55066 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC4.42□□□□□ -1.7
NcanP55066 Gm12582-201ENSMUST00000030555 697 ntBASIC4.42□□□□□ -1.7
NcanP55066 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NcanP55066 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NcanP55066 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
NcanP55066 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NcanP55066 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NcanP55066 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.42□□□□□ -1.7
NcanP55066 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NcanP55066 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
NcanP55066 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NcanP55066 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NcanP55066 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NcanP55066 Gm42479-201ENSMUST00000198654 1356 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.41□□□□□ -1.7
NcanP55066 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NcanP55066 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NcanP55066 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NcanP55066 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NcanP55066 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.41□□□□□ -1.7
NcanP55066 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NcanP55066 Gm38706-201ENSMUST00000182397 2617 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm25647-201ENSMUST00000101832 78 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm23942-201ENSMUST00000101956 107 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm25823-201ENSMUST00000101995 78 ntBASIC4.41□□□□□ -1.7
NcanP55066 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NcanP55066 Gm12087-201ENSMUST00000121878 258 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm22480-201ENSMUST00000122568 128 ntBASIC4.41□□□□□ -1.7
NcanP55066 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NcanP55066 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC4.41□□□□□ -1.7
NcanP55066 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.41□□□□□ -1.7
NcanP55066 Gm23496-201ENSMUST00000157741 248 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm16026-202ENSMUST00000159695 772 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm16563-201ENSMUST00000162673 423 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm24220-201ENSMUST00000177753 79 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm25988-201ENSMUST00000177759 79 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm23471-201ENSMUST00000177886 79 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm26488-201ENSMUST00000178225 79 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm23449-201ENSMUST00000179208 79 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm25221-201ENSMUST00000180051 79 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NcanP55066 Gm28574-201ENSMUST00000185757 699 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm28596-201ENSMUST00000185870 696 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm28397-201ENSMUST00000187970 699 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm28396-201ENSMUST00000190309 379 ntBASIC4.41□□□□□ -1.7
NcanP55066 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm32295-201ENSMUST00000192558 696 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm31260-201ENSMUST00000193478 696 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm37002-201ENSMUST00000194560 373 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm42694-201ENSMUST00000196951 358 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.41□□□□□ -1.7
NcanP55066 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC4.41□□□□□ -1.7
NcanP55066 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
NcanP55066 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.41□□□□□ -1.7
NcanP55066 AC131743.3-201ENSMUST00000222099 662 ntBASIC4.41□□□□□ -1.7
NcanP55066 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.41□□□□□ -1.7
NcanP55066 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.41□□□□□ -1.7
NcanP55066 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC4.41□□□□□ -1.7
NcanP55066 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NcanP55066 Gm25818-201ENSMUST00000083282 164 ntBASIC4.41□□□□□ -1.7
NcanP55066 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NcanP55066 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
NcanP55066 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NcanP55066 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NcanP55066 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
NcanP55066 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.4□□□□□ -1.7
NcanP55066 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms